Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2106 ATGGCCACCGCTCCTTCGCTTCTACACTCATCTGGGTCCTCTTTCTTCTCTCAATTTCGTGCCTTTCAATTCTCTTCTTCTTTGCTGTTCCCTCATAGTAACAAGCATGGGAATGCACTGGTCTCTGTGAAGGCCTCTGTTTCTGGGGTTGTGTTGGTGGAGAAGTCTGAGGCAGAGAAGGCCAATAGGCTCAAAACAGCTTACACTGAGAAAATTATTCCCTTGCTCATGGAAGAGTTCTCCTACACCAACAAACACCAGGTGCCTAAAATTGAGAAGATTGTGGTGAACTGTGGTATCGGAGATGCTGCACAAAATGCAAAGGGTTTGGACGCGGCAATAAGTGATCTAGCACTGATCACAGGGCAGAGACCTATTAAGACTCGGGCCAGGGCTTCTCTTGCCACCTTTAAGATCAGGGAAGGTCAACCACTTGGGATTTCTGTGACACTAAGAGGAAATATGATGTACTCATTCCTAGACCGAGTTGTCAACTTGGGACTTCCTAGGACAAGAGATTTCCAAGGTGTGAACCCCAACAGCTTTGATGGGCATGGGAACTACAGCATTGGCATTAAGGACCAGGGTGTCTTCCCAGAGATCAGAGCTGATGTTGTTGGTAAGCCTCGGGGAATGGATATCTGCATCGCAACAACAGCTAAAACCGACCAAGAAGCACACAAATTGTTGGCTCTTATGGGTATGCCCTTCAGAGAGGGAAGTGGTCCCGCCACCACAATTCGGAAAAAGAAGCTCAAGTCTCATCATTTTGATGCAAAATCAAAGGGAAGAGGAAGGAAGTGA 804 0.4714 MATAPSLLHSSGSSFFSQFRAFQFSSSLLFPHSNKHGNALVSVKASVSGVVLVEKSEAEKANRLKTAYTEKIIPLLMEEFSYTNKHQVPKIEKIVVNCGIGDAAQNAKGLDAAISDLALITGQRPIKTRARASLATFKIREGQPLGISVTLRGNMMYSFLDRVVNLGLPRTRDFQGVNPNSFDGHGNYSIGIKDQGVFPEIRADVVGKPRGMDICIATTAKTDQEAHKLLALMGMPFREGSGPATTIRKKKLKSHHFDAKSKGRGRK* 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2106 267 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 57 239 IPR002132 GO:0003735|GO:0005840|GO:0006412
Gso9g2106 267 ProSitePatterns Ribosomal protein L5 signature. 117 133 IPR020929 GO:0003735|GO:0005840|GO:0006412
Gso9g2106 267 Gene3D - 55 239 IPR022803 -
Gso9g2106 267 Pfam Ribosomal protein L5 84 140 IPR031310 -
Gso9g2106 267 Pfam ribosomal L5P family C-terminus 144 237 IPR031309 -
Gso9g2106 267 SUPERFAMILY RL5-like 63 238 IPR022803 -
Gso9g2106 267 PANTHER 54S RIBOSOMAL PROTEIN L7, MITOCHONDRIAL 57 239 - -
Gso9g2106 267 Hamap 50S ribosomal protein L5 [rplE]. 61 239 IPR020930 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2106 Gso-Chr9 45359614 45362862 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2106 K02931 - gmx:100800193 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1935 18 51780421 51783650 Gso9g2106 9 45359614 45362862 GST