Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2087 ATGGAACTTTTTCACAACCTCAAAATTCTCAGCACAATTCTGCTCCTATGCATGTTTCCTCACTCACTCAAGTGCCAACAAGCATACCTCAATGGCACTGTCTATGACTGTTCTGATAACCCTTCAGTCCCAAAAGGTTACCTTTGCAATGGCCTTCAGAAGTCATGCACTTCCTTCTTACTTTTCAGGTCAAAACCTCCCTATGATAGCCCCGAGAAAATTGCTTACCTTCTTGGCTCTGAGGCATCAACCATAGCCTCAATCAACATGATTTCAAGAAATGACAAGATTCCTTCCAATAAGTCAATCATTGTTCCTGTGTTCTGTTCATGTTCAGGAAACATCTACCAGCATAACACACCCTACACTGCAAGCAAGAATGACACCTACTATGAGTTGGTAAAAGAAACCTTCCAAGGCCTCACCACATGTCAGGCAATGATGGGTCGGAATTACTATGCTCCTGTCAACATTGTAATTGGTGCTGAGCTCACAGTTCCAAAGTTATGTGCTTGTCCAACTGAAAATCAGACAGCAAGAGGGATCACCTCTTTGCTGGTTTACTTGGTGAACTATGGTGACACTATTAAGTCCATAGGAAGGGCTTATGGTGTGGATGAACAAAGTGTGCTAGAGGCCAATAAGTTGGCAGAGCCACAAAGTTCAAACAGGAGCATGGACCTCTTTGCCTTGACACCTATTTTAGTTCCTTTAATAGGGAAGAGCTGCAAAGAGAACCCAGATAAATTCTATTGTAGATGTTACCAAGCACCAGATGGAATCCTCAAGGGGCCCTTCTGTGGTGAATCTGACGGTCAGAAATTCCCAGCCAAATTGGTTGCTGGTTTAGGAGTTGGAATTGGTGCAGGCTTTCTGTGCTTGTTTCTTTTGGGGTACAAATCATATCAATACATACAGAAAAAGAGAGAAAGTATCCTTAAAGAAAAGTTATTCAGGCAAAATGGTGGCTACTTGTTACAGGAGAAGCTCTCTTATGGAAATGGAGAAATGGCAAAGCTTTTTACAGCTGAGGAGCTGCAAAGAGCTACAGATAACTACAATAGGAGCAGGTTTCTTGGTCAAGGTGGCTATGGCACAGTGTACAAAGGAATGTTACCAGATGGAACCATAGTTGCAGTTAAAAAGTCAAAAGAGATTGAAAGGAACCAGATAAAGACTTTTGTCAATGAAGTAGTCATTTTATCTCAGATCAACCACAGGAACATTGTAAAACTATTAGGTTGTTGTCTTGAGACAGAAACTCCAATACTAGTCTATGAATTCATTCCTAATGAAACACTTTCCCATCACATACATAGGAGAGACAATGAACCCTCCCTTTCATGGGTTAGTCGCCTTAGAATCGCATGTGAGGTTGCAGGAGCAGTGACATATATGCATTTTTCAGCTTCTATTCCCATTTTCCATAGAGACATCAAACCCACCAACATACTTTTAGACAGTAACTACAGTGCCAAAGTGTCTGATTTTGGAACATCTAGATCAGTTCCACTAGATAAGACTCACTTAACCACAGCTGTTGGAGGAACTTTTGGGTACATAGACCCTGAGTATTTTCAGTCTAGTCAATTTTCAGATAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTGTAGAGCTCATAACTGGGAGAAAGCCTATTTCATTCTTATATGAAGATGAGGGTCAAAATCTGGTTGCTCAATTCATTTCTTTGATGAAGAAGAACCAAGTTTCTGAAATTTTTGATGCCAGGGTGCTCAAGGACGCAAGGAAAGATGACATTCTTGCTGTTGCAAATCTTGCAATGAGATGCTTGAGACTTAATGGGAAGAAAAGACCGACAATGAAAGAGGTTTCAGCAGAATTAGAAGCATTGAGAAAGGCACAAAGTTCATTACAGATGAGCCATGATCATGAGCACACAACTAGTAACATAGTTCAAGAGTGCACAGAGGAAAGCATATCACTGTCCTTACATCTAGAGTCCACATCCTTTTAG 2001 0.4093 MELFHNLKILSTILLLCMFPHSLKCQQAYLNGTVYDCSDNPSVPKGYLCNGLQKSCTSFLLFRSKPPYDSPEKIAYLLGSEASTIASINMISRNDKIPSNKSIIVPVFCSCSGNIYQHNTPYTASKNDTYYELVKETFQGLTTCQAMMGRNYYAPVNIVIGAELTVPKLCACPTENQTARGITSLLVYLVNYGDTIKSIGRAYGVDEQSVLEANKLAEPQSSNRSMDLFALTPILVPLIGKSCKENPDKFYCRCYQAPDGILKGPFCGESDGQKFPAKLVAGLGVGIGAGFLCLFLLGYKSYQYIQKKRESILKEKLFRQNGGYLLQEKLSYGNGEMAKLFTAEELQRATDNYNRSRFLGQGGYGTVYKGMLPDGTIVAVKKSKEIERNQIKTFVNEVVILSQINHRNIVKLLGCCLETETPILVYEFIPNETLSHHIHRRDNEPSLSWVSRLRIACEVAGAVTYMHFSASIPIFHRDIKPTNILLDSNYSAKVSDFGTSRSVPLDKTHLTTAVGGTFGYIDPEYFQSSQFSDKSDVYSFGVVLVELITGRKPISFLYEDEGQNLVAQFISLMKKNQVSEIFDARVLKDARKDDILAVANLAMRCLRLNGKKRPTMKEVSAELEALRKAQSSLQMSHDHEHTTSNIVQECTEESISLSLHLESTSF* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2087 666 ProSitePatterns Protein kinases ATP-binding region signature. 359 382 IPR017441 GO:0005524
Gso9g2087 666 Gene3D LysM domain 173 245 IPR036779 -
Gso9g2087 666 Gene3D Phosphorylase Kinase; domain 1 327 428 - -
Gso9g2087 666 Pfam LysM domain 188 219 IPR018392 -
Gso9g2087 666 CDD STKc_IRAK 359 626 - -
Gso9g2087 666 ProSiteProfiles Protein kinase domain profile. 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2087 666 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 26 652 IPR045274 GO:0007166
Gso9g2087 666 SUPERFAMILY Protein kinase-like (PK-like) 337 623 IPR011009 -
Gso9g2087 666 PANTHER LYSM TYPE RECEPTOR KINASE 26 652 - -
Gso9g2087 666 SMART serkin_6 353 626 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2087 666 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Gso9g2087 666 Pfam Protein kinase domain 353 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2087 666 Gene3D Transferase(Phosphotransferase) domain 1 429 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2087 Gso-Chr9 45178926 45181924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2087 284 630 Receptor kinase-like Gene Family AT1G16130 57.429 1.74e-139 424
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK Gso9g2087 Pkinase 2.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2087 - - gmx:100792803 1323.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1913 18 51549974 51553147 Gso9g2087 9 45178926 45181924 GST