Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2076 ATGGTTTCCCTTTCCACCACCCCTTTTCTCCCCTTCACTGCAAAAAACGCTTCTACTAGATTCCCACCTCCCAATTCATTCTCCCGCAACAAGCAACGTAGTAACAGGGATCACAGGAAGGTTGTCTGCGCCTGCATCGCACCTCCGCAGAACTTCAAGAGCCAGGACTCTTCCGCCATTAATTTCAATGGTTCGTCCAAATCAGAACAACTGAGCACGGCGTGGGATCATGAGGATGATTCTGATGTTCTTATTGAGTGTAGAGATGTGTATAAGTCTTTTGGGGAAAAGAAAATCTTAAATGGTGTCAGCTTCAAGGGAGAAGTATATATTCGAGGTAAAAAGAGAGTTGGTTTAGTAAGTGATGATGACATATCTGGTCTTCGGATTGGATTGGTTTTCCAAAGTGCAGCACTCTTTGATTCTTTGACTGTTCGTGAAAATGTTGGTTTTCTCTTGTATGAACACTCAAGCATGTCTGAGGACCAGATATCAGAGCTTGTCACGGAAACCTTGGCTGCAGTTGGATTGAAGGGAGTTGAGGATCGGTTGCCTTCTGAGTTATCAGGTGGGATGAAAAAGCGAGTTGCTTTAGCTCGATCTATTATTTGTGACACCACAGAGGAATCAAAAGAGCCAGAGGTGCTCTTGTATGACGAACCAACTGCTGGACTTGATCCCATTGCATCTACTGTTGTTGAAGATCTGATTCGCTCTGTGCACATAAAAGGACGAGATGCACGTGGAAAACCTGGGAATATTGCATCTTATGTGGTTGTTACTCACCAACATAGTACCATTAAAAGAGCCATTGATAGATTGTTGTTTCTACACAAAGGAAAGATTGTTTGGGAAGGAATGACTCATGAATTTACAACTTCAACTAATCCAATTGTCCAGCAGTTTGCATCCGGGAGCCTAGATGGTCCTATCAGATATTAG 942 0.4321 MVSLSTTPFLPFTAKNASTRFPPPNSFSRNKQRSNRDHRKVVCACIAPPQNFKSQDSSAINFNGSSKSEQLSTAWDHEDDSDVLIECRDVYKSFGEKKILNGVSFKGEVYIRGKKRVGLVSDDDISGLRIGLVFQSAALFDSLTVRENVGFLLYEHSSMSEDQISELVTETLAAVGLKGVEDRLPSELSGGMKKRVALARSIICDTTEESKEPEVLLYDEPTAGLDPIASTVVEDLIRSVHIKGRDARGKPGNIASYVVVTHQHSTIKRAIDRLLFLHKGKIVWEGMTHEFTTSTNPIVQQFASGSLDGPIRY* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2076 313 Pfam ABC transporter 107 223 IPR003439 GO:0005524
Gso9g2076 313 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 66 304 IPR003439 GO:0005524
Gso9g2076 313 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 106 313 - -
Gso9g2076 313 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 31 106 - -
Gso9g2076 313 MobiDBLite consensus disorder prediction 15 35 - -
Gso9g2076 313 Gene3D - 72 305 IPR027417 -
Gso9g2076 313 MobiDBLite consensus disorder prediction 15 30 - -
Gso9g2076 313 ProSitePatterns ABC transporters family signature. 188 202 IPR017871 GO:0005524
Gso9g2076 313 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 294 IPR027417 -
Gso9g2076 313 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 106 313 - -
Gso9g2076 313 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 3, CHLOROPLASTIC 31 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2076 Gso-Chr9 45094624 45099666 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2076 107 297 Calmodulin-binding Proteins AT2G36910 26.699 1.45e-06 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2076 - - gmx:100789283 604.364
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1902 18 51434497 51440267 Gso9g2076 9 45094624 45099666 GST