Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2062 ATGGAACAAGACAACCTTAACAACAACAACAATTGTGATGAGGAAACCTTTGTGTGTGACTCAAGAGAAACAAAAAGAAGCATTGCTGAGAGAAGGGGTTTCAATTCCAATGCTGCAAGAATCAACACAGCACTGTTTCGCACTGCAACTTCAACAATAAACCCTTCACCTTCCCTGGCCGCTCGATCACCTCGTCTCACCATCCCCCCTGGCATTAGTCCAACCGACTTGCTTGACTCTCCCATCATGCTTCCAAATTCTCAGGCCATATCTCCCACCACTGGCTCTTTCTTCATGCTGCCACCTCTCAGCCATGAAGGATCAATGCTCACAACTGAACAAGGGAATGTGGATGTGTCAACCGCATCTGATGTCGATGCCTCTTTCAAATTCAAGCCTCGTGGACATTTTGATCCTAATCATTTGCCTCCTTACTCTGCTTCTCTAAATCAGGTTTCTAGTAATTTCCACTCGGTAAAGGGAGGAAATAGAGAGAGTCACCTACTTGCTCAAGTTCAGCCACCATTAGATTTTTCATTCCGAGCAGATTTTTCAAAAGGCCATTCTGTGAAAAATAGTGAAGTGAATGCGTACAATGATATGAAAATGGTTAATGATGTGATTCTTAATGCCAATAATGTTGAGATGCCAATGTCTGGCTCTGAGGAAGTAAGTGATGAAAGCGCTCTGCCGAAAAATACTATCAATGGTGAGGATTTTGGAGGGCAACCTGCTTCAGAAGGAGAACAGAAAGAGGCATCCCATACAACAGGAGCAGTAAGGACCTCGGAGGATGGTTATAATTGGAGGAAATATGGACAAAAACAGGTAAAAGGTAGTGAGTATCCCAGAAGCTATTATAAATGCACACAGCCTAAATGTCAGGTCAAGAAAAAGGTGGAACGATCCCATGACGGTCAAATAACGGAAATTATTTACAAAGGTGCTCATAACCATGCACAACCGCACCCTGGACATAGAGCATCTTCACTTTCTACTGATGAGGTTTCAGACATGGCTGGAGACAGTACCTTAGCTAAAATTGAAGGTGGGTATGTTTGGAGAAATATTCAAACAGGATTAAGAGAAACAAAACAAAGTTTTGATTGGAAGGCTGATGGACAGGAAAGGACACCAACAACTTCTGCTGTGACTGAGCTTTCAGATCCTATATCAACTAACAAAGCTAAATCTCTATGTATGCTTGAATCGGAGGACACTCCAGAGCTTTCTTCTACACTTGCCAGTCATGATGGCGATGAAGATGGAACCACTCAAGCACTTGTCTCAGCTGAAGACGAAGCTGAGAATGATGAATTGGATTCAAAAAGAAGGAAGAAAGAGAGCTACGCAGTTGAACCAAATTTGCCCCCTACTAGGGCTGTTCGTGAGCCAAGAGTGGTTGTCCAAATTGAGAGTGATGTGGACATACTTGATGATGGTTACCGCTGGCGTAAGTATGGACAAAAGGTTGTCAAAGGAAATCCAAATCCTAGGAGCTACTACAAATGCACAAGTGCGGGATGTATGGTAAGGAAGCATGTGGAAAGGGCTTCTCAGAATCTGAAATATGTCCTAACTACTTATGAGGGAAAGCATAATCATGAAGTGCCCACTGCTAGAACAAACAATCAGGTAAACTCAAGTGATGGTGGTTTACCTCCCAATGGTGCTAATGGACAAGTTGCTCTTACATTACCAAAGCCCGAAACTCATCAAACTCTTTTTGGACATCATTTTGATAGAAAACCTGAATTCAGCAACGAGTTTCTCAGGGCTAGTTTGGTCGGAAGTTTCAGCAATGATATGAAGTTTGGACCTTCTACCCTTTGCCAAATGAAGTATCCTTCCTTGAATAATACCATGCCTTATGGCTCCTACGGACTGAACCATGAACATTGCACTGCCCCTCAAGCTGGATCCATTGCCTCAATGTTCCCCGATTTTCCAATGCCACTACCATTGAATCTTCCCTCATCTGGACTTAATTTTAACTGTGTCAAGCCAATGAATCGTATCCAGTCTTTCCTTTCTGGCCAGCAGGTGAAGGACATTGATGCGGGGTTCCTGAGGCCTAAACAGGAACAGAAGGATGATACTATGTACGGCTCGTGCATGCCCCCGCTAGATCATTCAAATGCTTCACTCACTTCTTCACCATCACCATCCATTTATCAACGTATGATGCAGAATTTCCCTTCATAA 2205 0.4327 MEQDNLNNNNNCDEETFVCDSRETKRSIAERRGFNSNAARINTALFRTATSTINPSPSLAARSPRLTIPPGISPTDLLDSPIMLPNSQAISPTTGSFFMLPPLSHEGSMLTTEQGNVDVSTASDVDASFKFKPRGHFDPNHLPPYSASLNQVSSNFHSVKGGNRESHLLAQVQPPLDFSFRADFSKGHSVKNSEVNAYNDMKMVNDVILNANNVEMPMSGSEEVSDESALPKNTINGEDFGGQPASEGEQKEASHTTGAVRTSEDGYNWRKYGQKQVKGSEYPRSYYKCTQPKCQVKKKVERSHDGQITEIIYKGAHNHAQPHPGHRASSLSTDEVSDMAGDSTLAKIEGGYVWRNIQTGLRETKQSFDWKADGQERTPTTSAVTELSDPISTNKAKSLCMLESEDTPELSSTLASHDGDEDGTTQALVSAEDEAENDELDSKRRKKESYAVEPNLPPTRAVREPRVVVQIESDVDILDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCMVRKHVERASQNLKYVLTTYEGKHNHEVPTARTNNQVNSSDGGLPPNGANGQVALTLPKPETHQTLFGHHFDRKPEFSNEFLRASLVGSFSNDMKFGPSTLCQMKYPSLNNTMPYGSYGLNHEHCTAPQAGSIASMFPDFPMPLPLNLPSSGLNFNCVKPMNRIQSFLSGQQVKDIDAGFLRPKQEQKDDTMYGSCMPPLDHSNASLTSSPSPSIYQRMMQNFPS* 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2062 734 ProSiteProfiles WRKY domain profile. 258 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 MobiDBLite consensus disorder prediction 404 458 - -
Gso9g2062 734 MobiDBLite consensus disorder prediction 368 390 - -
Gso9g2062 734 PANTHER WRKY TRANSCRIPTION FACTOR SUSIBA2-LIKE ISOFORM X1 7 703 - -
Gso9g2062 734 ProSiteProfiles WRKY domain profile. 473 538 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 7 703 IPR044810 GO:0003700
Gso9g2062 734 MobiDBLite consensus disorder prediction 404 420 - -
Gso9g2062 734 MobiDBLite consensus disorder prediction 437 451 - -
Gso9g2062 734 SMART WRKY_cls 478 537 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 SMART WRKY_cls 263 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 Gene3D WRKY domain 465 531 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 SUPERFAMILY WRKY DNA-binding domain 471 538 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 MobiDBLite consensus disorder prediction 218 262 - -
Gso9g2062 734 MobiDBLite consensus disorder prediction 373 390 - -
Gso9g2062 734 Pfam WRKY DNA -binding domain 479 536 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 Pfam WRKY DNA -binding domain 264 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 SUPERFAMILY WRKY DNA-binding domain 260 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso9g2062 734 Gene3D WRKY domain 249 323 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2062 Gso-Chr9 44988262 44992365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2062 1 541 WRKY Transcription Factor Family AT5G56270 40.741 3.01e-98 316
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso9g2062 WRKY 5e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1888 18 51328199 51332272 Gso9g2062 9 44988262 44992365 GST