Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g2058 | ATGCCGGTTGACAACATGGGAGATAATGTTACTGTCTCGACCACTCAACACCACATTGCAATCCCCATTGAGAAATTGAATGCATCACTTGAAGCTGCAAAGGAAGAAAATTCTGTAACCGATGATGCCTATGTGGACAATGATGTCCAAAAATCTCAAGAGAAAGATGAAGAAACTGAAGAGAAGGGAGAATGTCGCTACTGTCAGGAAGAGGACTTAGTTTCTAATATGGAATCACCCTGCAATTGCAATGGTAGCGTCAAGTATGTTCACAGGAGATGCATTGATCAATGGTACAATTCCAAAGGCCGCATGATATTGTGTGAGATTTGCAGGAAGCCTTACAATCCAAATGATTACCCGCCACTTCCAGAACTTCATTCTGATAATGATGACACCGAGATAATTATATTAAGGCAAGTTATATAG | 429 | 0.4056 | MPVDNMGDNVTVSTTQHHIAIPIEKLNASLEAAKEENSVTDDAYVDNDVQKSQEKDEETEEKGECRYCQEEDLVSNMESPCNCNGSVKYVHRRCIDQWYNSKGRMILCEICRKPYNPNDYPPLPELHSDNDDTEIIILRQVI* | 143 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g2058 | 142 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 57 | 118 | IPR011016 | GO:0008270 | |
Gso9g2058 | 142 | SUPERFAMILY | RING/U-box | 61 | 116 | - | - | |
Gso9g2058 | 142 | Coils | Coil | 23 | 43 | - | - | |
Gso9g2058 | 142 | PANTHER | RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN | 6 | 135 | - | - | |
Gso9g2058 | 142 | SMART | ringv_2 | 64 | 112 | IPR011016 | GO:0008270 | |
Gso9g2058 | 142 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 48 | 120 | IPR013083 | - | |
Gso9g2058 | 142 | PANTHER | RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING | 6 | 135 | IPR033275 | - | |
Gso9g2058 | 142 | CDD | RING_CH-C4HC3_MARCH | 65 | 112 | - | - | |
Gso9g2058 | 142 | MobiDBLite | consensus disorder prediction | 33 | 61 | - | - | |
Gso9g2058 | 142 | Pfam | RING-variant domain | 65 | 111 | IPR011016 | GO:0008270 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g2058 | Gso-Chr9 | 44962176 | 44965622 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g2058 | 54 | 115 | C3H Transcription Factor Family | AT2G22120 | 40.299 | 8.65e-08 | 48.1 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g2058 | - | - | gsj:114425561 | 288.885 |