Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2055 ATGGGGTCCTGCTTCTCTGCGGAAAGCAGGAGCCCTCCCTGCAATTCACCAAATTCATCATCTTTCAGGAAGAGAAAGAGCAACTCCAAGAAGAGGCTTGGATCAAGAGCCTCTTCATTTGAGTATTGGAGGAATGAGCCTCTTCATAGGATCCCTGGGAGGATCTTCCTCAATGGCTCATCCCAAGTTGCATCCTTGTTCACTCAACAAGGGAAGAAGGGCACCAACCAGGATGCCATGGTTGTTTGGGAGAACTTTTGTTCTAGAGAAGATACTATTTTCTGTGGAGTTTTTGATGGCCATGGTCCGTATGGTCACATGGTTGCGAAAAGAGTGAGGGATTCTCTTCCTCTAAAACTGAATGCCCATTGGGAACAAAGTGCATCTGGTGAAGAAGTCCTCAAGGAGATTAGCGTTAATACTGCAGGAAGCATGAATTCAGAAGAGGCTGCATTTGCATCTGCTGATGATGAATCCAGGGTATCTGTTGATGCCGAGGAAACAGAAAAACACCCAGAAATCTTTCAGACACTTAAAGAGTCTTTTTTGAAGGCATTCAAAGTTATGGATAGAGAACTGAAGATGCACCAAAGTATTGATTGCTTCTGTAGTGGGACGACAGCAGTAACTCTGGTTAAGCAGGGCCGTGATCTTATTATTGGAAATGTTGGTGACTCTAGAGCTGTTCTGGGTACAAGAGAGAAAGACAATTCTCTTGTTGCCATCCAGTTAACTGTGGATCTAAAGCCCAATCTTCCAGCTGAAGAAGAGAGAATTCGCAAATGTAAAGGACGTGTTTTTGCTCTTCAGGATGAACCTGAAGTTGCTCGAGTCTGGTTGCCAAACAATGACTCACCTGGCCTTGCCATGGCAAGGGCATTTGGAGATTTTTGTCTTAAAGATTTTGGCCTGATATCTGTTCCCGAGGTGTCATACAGACGAGTCACCGAGAAGGACGAATTTGTTGTCATGGCAACAGATGGGATTTGGGATGTTCTCTCAAACAAAGAAGTGGTGGACATTGTGGCAGCCGCGCCAAGGCGTGCCTTGGCTGCACGAGCGCTGGTTGAGTCAGCGGTTCGCTCATGGAGGTACAAGTATCCAACCTCCAAAGTGGATGACTGTGCTGTGGTTTGCCTCTTTCTGGACTCGGACTCGGACTCCCACAAAGTGTGTAGTGCTTCCAATGTCATCAAGTCCAAGGAACAACCTAGTTCAGGTATCCAAGTCCACAACGGTGACAGTGGAGATGTTCCTGCACCTACTGGTCTGGCAAGGTCAGGAACTTGCAGGGAAAACAATGAAGACAACAACAACAACAGCGAGGAAGAGTCTAAGGAAGAGGAAATAGATACTGATGCAGAAATAGAGTGGTCTGCTCTCGAAGGAGTGTCGCGTGTGAACACATTACTAAACCTCCCAAGGTTTGAACCTGACAAAGAAGACAAGGGGATGAGAAAACACAAATGA 1470 0.4626 MGSCFSAESRSPPCNSPNSSSFRKRKSNSKKRLGSRASSFEYWRNEPLHRIPGRIFLNGSSQVASLFTQQGKKGTNQDAMVVWENFCSREDTIFCGVFDGHGPYGHMVAKRVRDSLPLKLNAHWEQSASGEEVLKEISVNTAGSMNSEEAAFASADDESRVSVDAEETEKHPEIFQTLKESFLKAFKVMDRELKMHQSIDCFCSGTTAVTLVKQGRDLIIGNVGDSRAVLGTREKDNSLVAIQLTVDLKPNLPAEEERIRKCKGRVFALQDEPEVARVWLPNNDSPGLAMARAFGDFCLKDFGLISVPEVSYRRVTEKDEFVVMATDGIWDVLSNKEVVDIVAAAPRRALAARALVESAVRSWRYKYPTSKVDDCAVVCLFLDSDSDSHKVCSASNVIKSKEQPSSGIQVHNGDSGDVPAPTGLARSGTCRENNEDNNNNSEEESKEEEIDTDAEIEWSALEGVSRVNTLLNLPRFEPDKEDKGMRKHK* 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2055 489 Coils Coil 431 451 - -
Gso9g2055 489 Pfam Protein phosphatase 2C 111 360 IPR001932 -
Gso9g2055 489 PANTHER ALPHABET, ISOFORM E-RELATED 1 465 - -
Gso9g2055 489 MobiDBLite consensus disorder prediction 402 455 - -
Gso9g2055 489 SUPERFAMILY PP2C-like 56 383 IPR036457 -
Gso9g2055 489 SMART PP2C_4 54 380 IPR001932 -
Gso9g2055 489 MobiDBLite consensus disorder prediction 1 33 - -
Gso9g2055 489 MobiDBLite consensus disorder prediction 1 23 - -
Gso9g2055 489 PANTHER PROTEIN PHOSPHATASE 2C 33-RELATED 1 465 - -
Gso9g2055 489 ProSiteProfiles PPM-type phosphatase domain profile. 63 382 IPR001932 -
Gso9g2055 489 Gene3D - 58 384 IPR036457 -
Gso9g2055 489 MobiDBLite consensus disorder prediction 441 455 - -
Gso9g2055 489 CDD PP2Cc 62 382 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2055 Gso-Chr9 44931058 44935611 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2055 1 480 PP2C-type Phosphatase Gene Family AT3G02750 62.453 0.0 612
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2055 - - gmx:100782003 909.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1881 18 51266445 51270898 Gso9g2055 9 44931058 44935611 GST