Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2050 ATGTGTGGAATATTTGCGTATCTGAATTACGACGTGAACAGAGACAGACGATACATCTTGCAGGTTCTCTTCAATGGCCTCAGCAGATTGGAGTACCGTGGATACGATTCCGCAGGCATCGCGATCGACGATTCCAATTTCTCTCCCCTTGTTTTCCGTCAAGAAGGAAACATTGAATCGCTCGTCAAATCGGTTTATCAAGAAGTGGGAGAAACTGAACTGAACTTGGGGGAATGCTTCGGCACTCACGCGGGAATCGCGCACACTCGCTGGGCGACTCACGGAGAGCCTGCGCCTCGGAACAGTCATCCTCAGACCTCTGGTCCTGGTAACGAGTTCTTGGTTGTTCACAATGGAGTCATCACTAATTACGAGGTTTTGAAGGAAACGCTGCTCCGACATGGCTTCACCTTTGAATCTGAAACTGACACTGAGGTCATTCCCAAGCTTGCAAAGTTTGTTTATGACAAGGCGAATGAAGCAGCCGGTGGTCAGGTTGTTACCTTCAGCCAAGTTGTTCTTGAAGTTATGAGGCATCTTGAAGGAGCTTATGCCCTTATTTTCAAAAGTCTACATTATCCTAATGAATTGATTGCCTGCAAGCGTGGTAGCCCACTGCTGCTAGGTGTTAAAGAATTGACAGAAAATAAAGAAAATAGTTCAGCATTTGAGGATAACAAATTCCTATCAAAAGATGGAAAGCCTAGAGAATTGTTTTTGTCCAGTGATGCCAATGCTGTGGTTGAGCATACAAAGAAAGTGCTAGTTATTGAGGATGGTGAAGTAGTTCATCTCAAGGATGGTGGGGTTTCTATTTTGAAATATGAGAATGACATGGGAGAACATGGCGCTTCTCTTTCCAGAGCTTTCTCAGTGCGACGTGCATTATCTGTTCTAGAGATGGAGGTTGAGCAAATAAATAAAGGTAATTATGAGCATTATATGCAAAAGGAAATTCATGAGCAGCCAGAGTCTCTAACAACCACAATGAGGGGGAGGCTTATACATCGAGGATCTAACAAATCCAAGTCTGTTCTGTTGGGTGGGCTGAAGGATCACCTCAAAACAATTAGGCGAAGTAGAAGGATACTTTTCATTGGTTGTGGTACAAGTTATAATGCTGCTTTGGCAGCTAGACCCATCTTGGAAGAACTTTCTGGTGTTCCTGTTACTATGGAAATTGCTAGTGATCTATTGGATCGGGAGGGACCAATATACCGGGAGGATACTGCCGTTTTTGTTAGTCAATCTGGTGAAACTGCAGACACTTTACTTGCACTGCAATATGCTTTAGACAATGGTGCATTGTGTGTTGGGATAACAAACACTGTTGGTAGTGCAATAGCAAGGAATACACATTGTGGTGTTCATATAAATGCTGGTGCTGAGATTGGTGTGGCAAGTACCAAGGCATATACAAGTCAAATAGTAGTGATGGTCATGTTAGCTCTTGCAATAGGAGGCGATACAATTTCAAATCAAGCCAGAAGAGAAGCTATCATAGATGGTCTTTTTGACCTGCCAAATAAAGTCAGAGAGGTGCTGAAGCTTGATCAGGAGATGAAGGATCTAGCCAAGCAGTTGATTGCTGAGCAGTCTCTTCTTGTCTTTGGGAGAGGATACAACTATGCAACTGCTCTCGAGGGAGCTTTGAAAGTAAAGGAAGTGGCACTAATGCATAGTGAAGGGATGCTTGCTGGTGAAATGAAGCATGGTCCTTTGGCATTAGTGGATGAAAATCTCCCAATTGCTGTTGTAGCTACCCGTGATGCCTGCTTCAGCAAACAGCAGTCTGTTATTCAGCAACTTAATGCCCGCAGAGGTCGTCTGATAGTTATGTGTTCAAAAGGGGATGCTGCCTCTGTATGCCCTAATGAATCTTGTAGGGTAATTGAAGTCCCACAAGTTGAGGACTGTCTTCAACCTGTAATTAATGTAGTTCCATTACAGTTATTGGCATATCATCTCACTGTTCTCAGGGGACATAACGTGGACCAGCCTCGTAATCTTGCCAAGAGTGTCACAACGCAATAG 2034 0.4385 MCGIFAYLNYDVNRDRRYILQVLFNGLSRLEYRGYDSAGIAIDDSNFSPLVFRQEGNIESLVKSVYQEVGETELNLGECFGTHAGIAHTRWATHGEPAPRNSHPQTSGPGNEFLVVHNGVITNYEVLKETLLRHGFTFESETDTEVIPKLAKFVYDKANEAAGGQVVTFSQVVLEVMRHLEGAYALIFKSLHYPNELIACKRGSPLLLGVKELTENKENSSAFEDNKFLSKDGKPRELFLSSDANAVVEHTKKVLVIEDGEVVHLKDGGVSILKYENDMGEHGASLSRAFSVRRALSVLEMEVEQINKGNYEHYMQKEIHEQPESLTTTMRGRLIHRGSNKSKSVLLGGLKDHLKTIRRSRRILFIGCGTSYNAALAARPILEELSGVPVTMEIASDLLDREGPIYREDTAVFVSQSGETADTLLALQYALDNGALCVGITNTVGSAIARNTHCGVHINAGAEIGVASTKAYTSQIVVMVMLALAIGGDTISNQARREAIIDGLFDLPNKVREVLKLDQEMKDLAKQLIAEQSLLVFGRGYNYATALEGALKVKEVALMHSEGMLAGEMKHGPLALVDENLPIAVVATRDACFSKQQSVIQQLNARRGRLIVMCSKGDAASVCPNESCRVIEVPQVEDCLQPVINVVPLQLLAYHLTVLRGHNVDQPRNLAKSVTTQ* 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2050 677 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 2 268 IPR017932 -
Gso9g2050 677 CDD SIS_GlmS_GlmD_1 362 487 IPR035466 -
Gso9g2050 677 PANTHER GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING 1 677 - -
Gso9g2050 677 ProSiteProfiles SIS domain profile. 524 667 IPR001347 GO:0097367|GO:1901135
Gso9g2050 677 CDD SIS_GlmS_GlmD_2 519 675 IPR035490 -
Gso9g2050 677 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 2 275 IPR029055 -
Gso9g2050 677 SUPERFAMILY SIS domain 308 676 IPR046348 GO:0097367|GO:1901135
Gso9g2050 677 Pfam Glutamine amidotransferase domain 80 189 - -
Gso9g2050 677 PANTHER GLUTAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE [ISOMERIZING] 2-LIKE 1 677 - -
Gso9g2050 677 CDD GFAT 2 265 - -
Gso9g2050 677 ProSiteProfiles SIS domain profile. 353 492 IPR001347 GO:0097367|GO:1901135
Gso9g2050 677 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 2 286 IPR029055 -
Gso9g2050 677 Gene3D - 309 676 - -
Gso9g2050 677 Pfam SIS domain 528 659 IPR001347 GO:0097367|GO:1901135
Gso9g2050 677 Pfam SIS domain 357 484 IPR001347 GO:0097367|GO:1901135
Gso9g2050 677 Gene3D - 513 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2050 Gso-Chr9 44887276 44893177 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2050 21 209 PRT Gene Family AT2G16570 26.943 2.53e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2050 K00820 - gmx:100779312 1331.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1876 18 51218606 51225088 Gso9g2050 9 44887276 44893177 GST