Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2027 ATGAAGATGGCTATGGGTGGCCTAATTTCCGGTGCTGGTGTTATTATTGTTAGTTTCTTTCTGCTGATTCTCTGTGGCATGGTTTGTGGGACTGAGAGTGATTTATTCTGCTTGAAAAGTGTAAAGAGTGCACTTGAGGACCCCTACAATTATTTGCAATCTTGGAATTTCAATAACAATACCGAAGGGTATATATGCAAGTTTATTGGGGTTGAGTGTTGGCACCCTGATGAGAACAAGGTCTTGAATCTCAAACTTTCCAACATGGGACTCAAGGGCCCGTTCCCTCGCGGCATTCAGAATTGCACAAGCATGACAGGATTAGATTTTTCGCTTAACAGACTCTCTAAAACCATTCCGGCTGATATATCCACACTTCTTACATTTGTGACAACTCTTGATCTATCTTCAAATGATTTTACTGGGGAGATACCTGCATCCCTTTCAAATTGTACCTATCTTAATACTCTTAGACTTGACCAAAACCAACTCACCGGTCACATTCCTGCAAACTTGAGTCAGCTCCCGCGGCTTAAGTTGTTTAGTGTTGCCAATAATCTTTTGACAGGGCCAGTTCCACCCTTTAAACCTGGTGTAGCTGGTGCAGATAATTATGCAAATAATTCAGGCCTGTGTGGTAATCCCTTGGGTACTTGCCAGGTCGGGTCTTCAAAGAGTAACACTGCTGTTATAGCTGGAGCAGCTGTTGGTGGTGTGACTGTTGCAGCATTAGGTTTGGGCATTGGAATGTTCTTCTACGTGCGCCGTATTTCTTATAGGAAGAAGGAAGAGGACCCTGAAGGAAACAAGTGGGCAAGAAGTCTAAAGGGAACTAAAAAAATAAAGGTTTCTATGTTTGAGAAGTCAATTTCAAAAATGAACTTGAATGATCTCATGAAGGCTACTGATAACTTCAGCAAAAGCAATATTATTGGGACTGGAAGATCAGGAATTGTTTACAAAGCTGTCCTTCATGATGGCACATCACTCATGGTCAAGAGATTGCAGGAATCTCAATATTCAGAGAAAGAATTTCTGTCTGAGATGAATATACTAGGGTCTGTCAAACATCGTAACTTGGTTCCTCTTTTAGGTTTTTGTGTGGCTAAAAAGGAGAGGCTTTTGGTCTATAAAAATATGCCAAATGGTACCCTCCATGATCAACTACATCCTGATGCTGGTGCATGCACCATGGATTGGCCTCTAAGGCTCAAAATTGCAATTGGAGCGGCCAAAGGATTAGCATGGCTTCATCATAGCTGCAATCCCCGCATTATCCACCGAAACATAAGCTCTAAGTGCATCTTGTTGGATGCTGATTTTGAGCCCACAATTTCTGATTTTGGCCTTGCTAGATTGATGAACCCGATTGATACACATTTGAGTACTTTTGTGAATGGGGAGTTTGGGGATTTAGGTTATGTTGCTCCTGAATATACAAAAACTTTGGTGGCTACTCCTAAAGGGGATATTTATAGCTTCGGGACCGTGCTTCTTGAATTGGTGACAGGTGAAAGACCTACCCATGTGGCTAAAGCTCCAGAAACTTTTAAAGGAAATTTGGTAGAGTGGATTCAACAGCAATCTAGCAATGCAAAACTCCATGAAGTCATTGATGAATCACTAGTTGGGAAGGGTGTAGACCAGGAGCTTTTCCAATTTCTGAAGGTTGCAAGCAACTGTGTTACAGCAATGCCAAAGGAGAGGCCTACCATGTTTGAAGTATACCAGTTTCTAAAAGCCATTGGGATTAATTACAATTTCACAATTGAGGATGAGATCATGCTCCCTATAGACACTGGTGATGCTGATAACTTAGAAGAACTTATTGTAGCTCGAGAGGGACATAATTGA 1854 0.4159 MKMAMGGLISGAGVIIVSFFLLILCGMVCGTESDLFCLKSVKSALEDPYNYLQSWNFNNNTEGYICKFIGVECWHPDENKVLNLKLSNMGLKGPFPRGIQNCTSMTGLDFSLNRLSKTIPADISTLLTFVTTLDLSSNDFTGEIPASLSNCTYLNTLRLDQNQLTGHIPANLSQLPRLKLFSVANNLLTGPVPPFKPGVAGADNYANNSGLCGNPLGTCQVGSSKSNTAVIAGAAVGGVTVAALGLGIGMFFYVRRISYRKKEEDPEGNKWARSLKGTKKIKVSMFEKSISKMNLNDLMKATDNFSKSNIIGTGRSGIVYKAVLHDGTSLMVKRLQESQYSEKEFLSEMNILGSVKHRNLVPLLGFCVAKKERLLVYKNMPNGTLHDQLHPDAGACTMDWPLRLKIAIGAAKGLAWLHHSCNPRIIHRNISSKCILLDADFEPTISDFGLARLMNPIDTHLSTFVNGEFGDLGYVAPEYTKTLVATPKGDIYSFGTVLLELVTGERPTHVAKAPETFKGNLVEWIQQQSSNAKLHEVIDESLVGKGVDQELFQFLKVASNCVTAMPKERPTMFEVYQFLKAIGINYNFTIEDEIMLPIDTGDADNLEELIVAREGHN* 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2027 617 SUPERFAMILY L domain-like 31 194 - -
Gso9g2027 617 Pfam Leucine rich repeat N-terminal domain 32 74 IPR013210 -
Gso9g2027 617 ProSiteProfiles Protein kinase domain profile. 305 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g2027 617 PANTHER LRR RECEPTOR-LIKE KINASE 15 593 - -
Gso9g2027 617 Gene3D Transferase(Phosphotransferase) domain 1 380 594 - -
Gso9g2027 617 SUPERFAMILY Protein kinase-like (PK-like) 282 581 IPR011009 -
Gso9g2027 617 Gene3D Phosphorylase Kinase; domain 1 266 378 - -
Gso9g2027 617 Pfam Protein tyrosine and serine/threonine kinase 308 579 IPR001245 GO:0004672|GO:0006468
Gso9g2027 617 Gene3D Ribonuclease Inhibitor 32 220 IPR032675 -
Gso9g2027 617 CDD STKc_IRAK 311 582 - -
Gso9g2027 617 PANTHER RECEPTOR-LIKE PROTEIN 55 15 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2027 Gso-Chr9 44697070 44700251 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2027 20 593 Receptor kinase-like Gene Family AT3G28450 45.626 0.0 529
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Gso9g2027 PK_Tyr_Ser-Thr 2.5e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2027 - - gmx:100817267 1226.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1847 18 50980669 50983776 Gso9g2027 9 44697070 44700251 GST