Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2024 ATGCAAACCTTCTTCTTGTACCTTTTCCTTTTCTTCTTGTTATGTGCACTTCAACAACTAGCCTCATCCCAACCCTTCTTCCTCAATAGAAGGATCCTCCATGAACCCTTTGTTCCTTTAACCAGTACTCTTCCACCTTCTGAGGCACCAAAGCCACAACCTCTTCATGCTTCTCCTTCAAGCCAAAAACAAAAACCAAATCCAAAATATCCATCATCTACCATTCCCACAACCTCTACCACTGCCACAGCAGTACCAACACCAACAACAGCTACAACTACAACACAATCACCATTTTTCCCATTATACCCTTCTTCCCCTCCACCTCCTTCTCCAATCACCTTTGCTTCCTTCCCTGCCAACATTTCCTCTCTCATTCTCCCTCACTCTCCCAAACCCAATTCTTCCTCCAACAAACTCCTCCCTGTTGCTCTCTCCGCCGTCGCCGCTGCGGTCCTCGCTATAATCATCTCCGCCGTCGTCTGTTACCGCCGTCGCCGGAACCATCCCCTCGCCGCCGAAGGCAAACTTATCCGATCCGACACCGACCTCCGCCTGCTCCGGCACAATGCCGAAACCGCCGTCGAAACTCGCAAGCTCCGGCACACGTCTTCCGCCAGCTCCGAGTTTCTATATCTAGGAACAGTAGTTAACTCGCACGTAACTGACGATAGCGCCGACGTCTCCGACGCCGGCGGCGACCGGAAAATGAAATCGCCGGAGCTCCGGCCACTTCCGCCCCTCGCGCGACAAGCTTCCTTGCCGCCGCCGCCGCCGTGCGAGGAGGCGGGGTTCACCACCGCGGAGGAGGAGGGGGAGGACGATGAGGAGTTTTACTCGCCGAGAGGCTCCTCGTTAGGAGGCTCCGGCGGAACCGAATCGGGTTCCCGGCGAATTTTCGCCGCTGGAGGAAGAAGCGTCATCTCTAGTTCGTGCTCTTCCTCTTCTTCCGCCTCGCCGGAAAGGTCACACTCTATCGCGAATTCGCCGTCGGCGAGTTCGAGTTCCCGGAGAACACAGCCAAAGTCTCCTGAAAATTACAACCACCAACACGTGCAATCTTCTTCTTCTCCTTCGTTGTGCTCAACACCAGAAAGGGTTTTTACTGAACATAATTCAAATGAAGCATTAAGTGCATGTACACATGCACATGCATCATCATCATCATCATCATCATCATTACATGAAGGAACGTTGGAGAAAAATGAAAATGCATTATCATCATCACTACCACCACCACCACCACCACCGAGACTATCTAATGCTTCTTCGTCTTCTTCGGCTTTTTCTCTTCCCTCTTCGCCGGAGAAGGTGACACGTAATAACACTTTCGATCAGTCTCCAAGAATGTCGAGTGTCTCCGACGGACTAATGTTACCGGGTTTGTCATCGGTGCCTTTGTCACCCGCCCTATTGTCATCACCGGAAACCGAAAGGGGAACTTTTAATGGATGGAGAACAAGTTCTTTTGGTGCGGCTGCGCCGCAGAGGAAACAATGGAATCTTCCGGTGCTATCACTAACACCACCCTTTGATGAAATTGGAACGGTTCCGGCTCCTCCACCTTTGCCACAGAGGAAGCACTGGGAGATTCCGGGTTCTGGTCCGCCACCGCCGCCACCATTGCCACGGCAAAGGAAACAGTGGGGAGTGCCAGCGCTTGCACTGGGGTCCTCGACACCGATTTCGAGGCCGCCAGAATTGTTGCCTCCTTCGAGACCTTTTGTGTTGCAAAACCAAGGAAGCAATGTCGAGTTGCCGGCGAGTTTGGGGGAAATTGAAGAGACTAGTAAACCAAAATTGAAGCCCCTGCATTGGGACAAAGTAAGAACCACCTCTGATCGTCAAATGGTGTGGGATCAGATGAAGTCCCGCTCGTTTAAATTGAATGAGAAAATGATTGAAACATTGTTTGTAGTGAACACACCAAACCCAAACTCAGTTTTTCACCAGCCGAATCAGGAGGAAAGAGTACTCGATCCTAAAAAGTCTCAGAATATTTCAATCTTGCTGAAAGCACTTAATGTCACTATAGAAGAAGTGTGTGAAGCACTCTTAGAAGGTAGTACTGATACACTTGGAACAGAATTACTTGAAAGCTTATTAAGAATGGCACCAAGCAAGGAAGAAGAATGTAAGTTGAAGGAACATAAAGATGACTCACCAACCAAGCTTGGTCCGGCTGAAATTTTTTTGAAGGCAGTGCTTGATGTACCTTTTGCATTTAAAAGGATTGAAGCGATGCTTTATATAGCCAATTTTGAGTCTGAAGTGGAGTATCTTAGGACATCCTTTCAAACTCTACAGACTGCCTGTGAAGAGCTGCGACATTGTAGAATGTTCATGAAGCTTCTGGAGGCTGTACTTAAAACTGGGAACCGCATGAATGTGGGGACCAACCGCGGGGATGCAGAGGCATTCAAACTTGATACTCTTCTCAAACTGGTTGACGTCAAAGGCGCAGATGGGAAAACCACTCTACTGCATTTTGTTGTACAGGAAATTATCCAAACTGAAGGTGCTTGTCTCTCGGGCACTAATCAAACTCCAAGCTCTACTTTGAGTGGAGATGCCAAGTGTAGGAGGCTTGGACTACAAGTTGTATCAAGCCTGAGTTCCGAGCTAGCAAATGTGAAGAAGGCAGCAGCTATGGATTCTGAAGTTCTCAGCAGTGATGTCTTGAAACTTTCCAAAGGAATTGCTAGCTTAGCAGAGGCTGTGCAATTAAACCAAACCATGGCATCAGATGAAAGCAGTCAGAAATTCACAGAATCAATGAACAAATTCATCAGAATGGCTGAGGAGGAAATTCCAAAAATTCAAGCCCAAGAAAGTGTTGCTTCCTCCCATGTGAAGGAGATTACAGAGTATTTTCTTGGGAACTTGACAAAGGAAGAAGCTCATCCATTTAGAATATTCATGGTTGTAAGAGACTTCCTAGCAGTTCTTGACCGGGTCTGCAAAGAAGTTGGAATGATAAATGAGAGAACTATGGTTAGTTCAGCTCATAAATTCCCTGTGCCAGTTAACCCTATGCTTCCACAACCCCTTCCTGGATTACATGAGAGACAACAGTATAATGACTCTTCAGATGATGATAGTTCATCTTCATCACCATAG 3120 0.4785 MQTFFLYLFLFFLLCALQQLASSQPFFLNRRILHEPFVPLTSTLPPSEAPKPQPLHASPSSQKQKPNPKYPSSTIPTTSTTATAVPTPTTATTTTQSPFFPLYPSSPPPPSPITFASFPANISSLILPHSPKPNSSSNKLLPVALSAVAAAVLAIIISAVVCYRRRRNHPLAAEGKLIRSDTDLRLLRHNAETAVETRKLRHTSSASSEFLYLGTVVNSHVTDDSADVSDAGGDRKMKSPELRPLPPLARQASLPPPPPCEEAGFTTAEEEGEDDEEFYSPRGSSLGGSGGTESGSRRIFAAGGRSVISSSCSSSSSASPERSHSIANSPSASSSSRRTQPKSPENYNHQHVQSSSSPSLCSTPERVFTEHNSNEALSACTHAHASSSSSSSSLHEGTLEKNENALSSSLPPPPPPPRLSNASSSSSAFSLPSSPEKVTRNNTFDQSPRMSSVSDGLMLPGLSSVPLSPALLSSPETERGTFNGWRTSSFGAAAPQRKQWNLPVLSLTPPFDEIGTVPAPPPLPQRKHWEIPGSGPPPPPPLPRQRKQWGVPALALGSSTPISRPPELLPPSRPFVLQNQGSNVELPASLGEIEETSKPKLKPLHWDKVRTTSDRQMVWDQMKSRSFKLNEKMIETLFVVNTPNPNSVFHQPNQEERVLDPKKSQNISILLKALNVTIEEVCEALLEGSTDTLGTELLESLLRMAPSKEEECKLKEHKDDSPTKLGPAEIFLKAVLDVPFAFKRIEAMLYIANFESEVEYLRTSFQTLQTACEELRHCRMFMKLLEAVLKTGNRMNVGTNRGDAEAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIQTEGACLSGTNQTPSSTLSGDAKCRRLGLQVVSSLSSELANVKKAAAMDSEVLSSDVLKLSKGIASLAEAVQLNQTMASDESSQKFTESMNKFIRMAEEEIPKIQAQESVASSHVKEITEYFLGNLTKEEAHPFRIFMVVRDFLAVLDRVCKEVGMINERTMVSSAHKFPVPVNPMLPQPLPGLHERQQYNDSSDDDSSSSSP* 1040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2024 1039 ProSiteProfiles Formin homology-2 (FH2) domain profile. 591 1009 IPR015425 -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 1010 1039 - -
Gso9g2024 1039 SMART it6_source 591 998 IPR015425 -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 223 488 - -
Gso9g2024 1039 PANTHER FORMIN-LIKE PROTEIN 1 9 1037 - -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 43 103 - -
Gso9g2024 1039 Pfam Formin Homology 2 Domain 595 983 IPR015425 -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 227 241 - -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 514 546 - -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 513 547 - -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 421 453 - -
Gso9g2024 1039 SUPERFAMILY Formin homology 2 domain (FH2 domain) 604 995 - -
Gso9g2024 1039 Gene3D Formin, FH2 domain 592 992 IPR042201 -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 467 488 - -
Gso9g2024 1039 PANTHER FORMIN-RELATED 9 1037 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Gso9g2024 1039 MobiDBLite consensus disorder prediction 54 100 - -
Gso9g2024 1039 MobiDBLite consensus disorder prediction 306 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2024 Gso-Chr9 44671240 44676243 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2024 549 1025 FH2 protein (formin) Gene Family AT3G25500 70.243 0.0 687
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2024 - - gmx:100806759 1617.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1843 18 50946469 50951423 Gso9g2024 9 44671240 44676243 GST