Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2015 ATGGCCTCCCCTTCTTCCCCCACCGACTCCAACCCTCCCTCTGCCCTCCCCCTCCCTATCCCTCCCCCTCCCTCCACCTCCTCCCGCCGTCTCCCTCCTCCCTGCTGGACCCCCGAGGAAACCTCCGCCCTCATCGACGCCTACCGCGACAAATGGTACTCCCTCGGCCGCACCAACCTCAAGGCCACCCATTGGCAAGAGGTGGCCGACTCCGTCACGGCGCAGTGCCCCAACGCCTCCCCCACGGCCAAAACCCCCGTGCAGTGCCGCCACAAGATGGAGAAGCTCCGCAAACGGTACCGCACCGAAATCCAACGCCTCCGCAACCTCCCCCTTCCCCGCCTCAACAACGCCAGCACCAATTCCCCTTCCTCCTGGCTCCACTTCAAATCCATGGACTCCATGGAAAAAGGCCCCAACCACAAACCTCACGCCGACAACAACCTTAACATCAACAACAATTTCCACGATGACGACGTCGACGACGACGATCTGTACGAGGAATTCAAAAACGCCCCCGGATCCAACACCAGGAGCCTCAACAAGCTCTACAAGAACAACAACGGATTCAATTCGGCTGGTTCGGGCTCCGGATCCGGATTTCGGATCCGGATCCCGGCCGGCGTGCCACAACAACAACACCATACGGCGTCGTCAAATAAGATTTTTAACAGCCATCCTCCTCCCGGGATGGGGCCACGTGGCGGGGGCGTGAAGAGGGAGCGCGAGAGGGACGCGGTGGCGGAGATGGTGGGGGCTATTAAGGTCCTTCGCGACGGGTTCGTGAGGATGGAGCAGATGAAGATGGAGATGGCCAGGGAGATCGAGAGCATGCGGATGGAGATGGAGATGAAGCGCACCGAGATGATCCTGGACTCGCAGCAGAGGATTGTGGAGGCTTTTGCTAGGGCCGTTTCGCAGAAGAGGACCAAGGGCAAGTCCACGCCCTCGCCTTCATCGCAACCGTAG 969 0.6058 MASPSSPTDSNPPSALPLPIPPPPSTSSRRLPPPCWTPEETSALIDAYRDKWYSLGRTNLKATHWQEVADSVTAQCPNASPTAKTPVQCRHKMEKLRKRYRTEIQRLRNLPLPRLNNASTNSPSSWLHFKSMDSMEKGPNHKPHADNNLNINNNFHDDDVDDDDLYEEFKNAPGSNTRSLNKLYKNNNGFNSAGSGSGSGFRIRIPAGVPQQQHHTASSNKIFNSHPPPGMGPRGGGVKRERERDAVAEMVGAIKVLRDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILDSQQRIVEAFARAVSQKRTKGKSTPSPSSQP* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2015 322 Coils Coil 268 288 - -
Gso9g2015 322 MobiDBLite consensus disorder prediction 10 31 - -
Gso9g2015 322 Gene3D - 36 102 - -
Gso9g2015 322 MobiDBLite consensus disorder prediction 1 36 - -
Gso9g2015 322 ProSiteProfiles Myb-like domain profile. 36 97 IPR001005 -
Gso9g2015 322 SMART 118neu2 43 140 IPR006578 -
Gso9g2015 322 MobiDBLite consensus disorder prediction 218 238 - -
Gso9g2015 322 Coils Coil 90 110 - -
Gso9g2015 322 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 317 IPR044823 -
Gso9g2015 322 PANTHER TRANSCRIPTION FACTOR 4 317 - -
Gso9g2015 322 Pfam Myb/SANT-like DNA-binding domain 34 135 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2015 Gso-Chr9 44610021 44610989 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2015 35 135 Trihelix Transcription Factor Family AT3G14180 30.693 1.04e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Gso9g2015 Myb_DNA-bind_4 1.3e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2015 - - gmx:102665993 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1832 18 50867870 50869704 Gso9g2015 9 44610021 44610989 GST