Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g2005 ATGGAAGGAGAGAGAGGTGGCGCACCCAATTATGAGCTTCAAGTTTCGTTCACCAACACCCCACAGGCCATACACGAATTGGGTTTTGTTCAATATGAAGAAAACCAGGTCCTTGGCTTCTTGTCACCCTCTTCACAATCTCAATCTTCTCCCCTCTCTCAATCCTTAAAGAGTGATACCCTCGTCGTCGCTACTGCCACCACTGCAATCGCCGCTGCAGCAACCATCGGATTCGTGAGTCATAGCGAACTTGCCATCAAAACTTGGAATAACGACCAGGAGGTAGGAACTCTGGATCCAAAGCCTGTCGAAGAAGAAAATTGCACTGGAAATGGTAGTGATCAAGGCAACAACAACGCTTGGTGGAGGAGCGCAGCAACAGAAAAGAACAAGTTGAAAATAAGGAGGAAGCTTAGAGAACCAAGGTTTTGTTTCCAAACAAGAAGTGATGTAGATGTGCTTGATGATGGTTACAAATGGAGGAAATATGGCCAGAAAGTTGTCAAGAATAGCCTTCATCCAAGAAGTTATTACCGGTGCACCCACAACAACTGTAGGGTGAAGAAGAGGGTTGAACGACTATCAGAGGATTGTCGTATGGTGATAACCACCTATGAAGGTAGACACAATCACTCCCCTTGCGACGATTCAAATTCATCAGAGAATGAATGCTTTACCTCTTTCTAG 687 0.4527 MEGERGGAPNYELQVSFTNTPQAIHELGFVQYEENQVLGFLSPSSQSQSSPLSQSLKSDTLVVATATTAIAAAATIGFVSHSELAIKTWNNDQEVGTLDPKPVEEENCTGNGSDQGNNNAWWRSAATEKNKLKIRRKLREPRFCFQTRSDVDVLDDGYKWRKYGQKVVKNSLHPRSYYRCTHNNCRVKKRVERLSEDCRMVITTYEGRHNHSPCDDSNSSENECFTSF* 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g2005 228 Pfam WRKY DNA -binding domain 155 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2005 228 PANTHER WRKY TRANSCRIPTION FACTOR 12-RELATED 14 226 - -
Gso9g2005 228 SMART WRKY_cls 154 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2005 228 Gene3D WRKY domain 140 214 IPR036576 GO:0003700|GO:0006355|GO:0043565
Gso9g2005 228 ProSiteProfiles WRKY domain profile. 149 211 IPR003657 GO:0003700|GO:0006355|GO:0043565
Gso9g2005 228 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 14 226 IPR044810 GO:0003700
Gso9g2005 228 SUPERFAMILY WRKY DNA-binding domain 146 212 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g2005 Gso-Chr9 44533876 44541196 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g2005 3 228 WRKY Transcription Factor Family AT2G44745 53.879 2.87e-72 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Gso9g2005 WRKY 1.6e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g2005 - - gmx:100526878 448.358
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1821 18 50783153 50791555 Gso9g2005 9 44533876 44541196 GST
Gso3g0929 3 32923041 32931279 Gso9g2005 9 44533876 44541196 PCT