Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1999 ATGGTATCCATCAAGATTCTTTTCTCGTTTGTTTTGGTGTTTCTAGCACACTCTTCACCCCAATTTGCTTGTTTATCCAAAACCATTTCTTTGGCCTCTGCTGCCAGCATAGTTACTGCTCGTGATCAAGCTGCAGCTGAGAAGGGTGGCAGCTTGAATCAAATACTAAGAAATGATACAGAAGCAGCTGCATTTGACTGGGAAAAGAGGGTGAATGTTGTTAAAGGTGTGGCCAATGCTTTATCCTATATGCATCATGGTTGTTCACCTCCCATAATTCATTGTGATATATCGAGCAATAATGTTCTTTTGGATTCACAATATGAAGCTCATGTCTCTGATTTTTGGACAGTTAAGATTCTGAAGCCTGGTTCACACACTTGGACCGAGTTTGCAGGCACTTTTGGGTATGCAGCTCCAGAACTTGCCCAGACTATGGAAGTGACTGAGAAATGTGATGTGTTCAGTTTTGGCGTGCTTTCTTTGGAAGTCATCATGGGGAAGCATCCAGGAAATTTCATTTCTTCATTGTTATCTTCACCTTCAGCAAAAATAGCTTATAATTGGCCACTAATTGATGTTTTAGACGAAAGACCTCCTCAACCTCCAAAAAAATCAATTGTTGGGGATGTCATTTTGGTTGCAAGCTTGGCAGTTTCTTGCTTGAGTGAAACTTCAAGTTCTCGTCCAACCATGGAAGTGTCTAAAATGCTTATGACAGGGAAATCACCTTTAGCAGACCAGTTCCCTATGATTAGACTTGGGCAACTCCTGTATCACTGA 783 0.4125 MVSIKILFSFVLVFLAHSSPQFACLSKTISLASAASIVTARDQAAAEKGGSLNQILRNDTEAAAFDWEKRVNVVKGVANALSYMHHGCSPPIIHCDISSNNVLLDSQYEAHVSDFWTVKILKPGSHTWTEFAGTFGYAAPELAQTMEVTEKCDVFSFGVLSLEVIMGKHPGNFISSLLSSPSAKIAYNWPLIDVLDERPPQPPKKSIVGDVILVASLAVSCLSETSSSRPTMEVSKMLMTGKSPLADQFPMIRLGQLLYH* 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1999 260 Pfam Protein kinase domain 48 233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1999 260 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 48 257 - -
Gso9g1999 260 ProSiteProfiles Protein kinase domain profile. 1 246 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1999 260 SUPERFAMILY Protein kinase-like (PK-like) 48 233 IPR011009 -
Gso9g1999 260 PANTHER LRR RECEPTOR-LIKE KINASE 48 257 - -
Gso9g1999 260 Gene3D Transferase(Phosphotransferase) domain 1 48 248 - -
Gso9g1999 260 ProSitePatterns Tyrosine protein kinases specific active-site signature. 92 104 IPR008266 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1999 Gso-Chr9 44463442 44464568 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1999 49 232 Receptor kinase-like Gene Family AT2G35620 42.132 4.71e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso9g1999 Pkinase 9.2e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1999 - - gsj:114368532 518.079