Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1994 ATGGAGAGGGTTGCAGAGCCAAAGGTACTTCCTCGGTCCTTGCCTGTTCTAGTTGAGGTATCCAATGCACACACGGATGCAATAAGGGAAGCTGGTCAAAGACTAAATGGGCAGGATGTTTCGAGTGTGCGTGGAATTCCAGGAAGGGAAGGGAATCAGTTTTTGAAAGCGCGGGATGGCCCTATGAAACGTCTGGCCTCCATCAGAGAAGTGGCCCAGTTATCAAATGCACGAATAGTTTTGGTAAGAGAGGATATGGGATTCGATACACGCTGTCAAGAGCCTCCCTCCCCTGCGCCTACAAGAATGTGGAAAGGAAAGGGCTCTTTACCGGAAGCTGTAGAACTTGTGCCTGATATTGAGAAATTGAAGGGTGGCAATGATTCTTTTGTGGAAACTGGTCCAAGTTCATTTGCAGGTGCTAGTCATCCCCCAGAACCTGTTGATACTGATCTTATGAGAACGGTTTTTGTACCAATAGGTCAAACTAAATCTGAAGCTGGATGCTTACTGAAGAGCGTGTCCTTGAAGGGTCCTTTCTTAGAAGATCTTTCAATTCATGTTCCTGCAAAGAAACCAAGCCTGGCTGTTGTTTCTCCTGCAGAAAGCATGGTTGAAGAATCAAATGAGATGGGTAATTTATCTTCGCCATTTTTAGGAGCTCGTGCATCACAGAATACTGAGAACTCTCCCCTTGCCCCAGATTCTGAGGAGAAAGAATGTGTTTGGGATGCCTCATTGCCTCCAAGTGGCAATGTCAGCCCTCATAGCAGTATTGACAGTACTAGTGTTGTCAGAACAATGAGCATTGCTAATAGTTGTGCAAGTACATATCGAAGTGATGCAGTCACTAGCGATGGCATGCTTAGTTTGGACAGGAATTGTGATAGCACTAAAGGAAGTGTAAGAGGGGATTCACTTGAGAGTGCAAAAACTAGTGCTAGTCGAGCAAGTGACAGCAGTGGCCTCAGTGATGACAGCAACTGGAGTAACATTACTGGCAGTGCCAACAAGCCCCACAAAGGAAATGATCCTAGGTGGAAGGCTATCCTTGCCATCCGAACACGGGATGGAATTTTGGGCATGAGTCATTTTAGGTTACTCAAACGGCTTGGTTGTGGTGATATTGGAAGTGTATATCTCTCAGAGCTGAGTGCAACTCGGTGCTTTTTTGCAATGAAAGTTATGGACAAGGCATCCTTAGCAAGCAGAAATAAGCTGACTAGAGCACAGACAGAAAGAGAGATATTGCAGTTGCTTGACCATCCATTTCTGCCTACTTTGTATACACATTTTGAAACTGACAGATTCTGCTGTTTGGTGATGGAATACTGTCCAGGGGGTGATCTACACACTTTAAGGCAAAGGCAACCTGGGAAACATTTCTCAGAGTATGCTGCACGCTTTTATGCTGCAGAGGTCCTGTTGGCACTTGAATATCTTCACATGCTTGGAGTTGTGTATCGAGACCTTAAACCTGAAAACGTACTGGTCCGAGATGATGGTCACATAATGCTCTCAGACTTCGATCTTTCTCTCCGATGTGCTGTTTCACCTACCCTTATTAGAAATTTTGACAGTGACCCCTCAAAACGAGGTGGTGGTGCATTCTGTGTCCAGCCAGCATGTATCGAGCCTTCATCAGTATGCATCCAGCCTTCATGTTTCATGCCCCGGCTCTTTGCTCAGAAAAATAAGAAATCACGAACGCCTAAAGCAGAACCTGGCATGCCGTCCAGCACGCTTCCTGAGCTTGTTGCCGAACCAACAACAGCTCGGTCAATGTCTTTCGTTGGCACTCACGAATACCTTGCCCCTGAAATCATCAAAGGAGAAGGTCATGGAAGTGCAGTTGATTGGTGGACATTTGGAATTTTCTTGCACGAGTTACTATATGGTAAAACTCCTTTCAAAGGATCAGGAAACCGTGCAACACTGTTCAACGTAGTAGGCCAGCAGCTCAGATTTCCTGAATCTCCGGCCACGAGTTATGCCAGCCGTGATCTGATCCGGGGCTTGCTGGTGAAGGAGCCGCAGCACCGACTTGGGGTGAAGAGGGGCGCGACCGAGATCAAACAACACCCCTTCTTTGAAGGCGTGAACTGGGCGTTGATTAGGTGCAGCACACCACCTGAAGTTCCAAGACCAGTTGAATGTGATCTACCAGCAAAGTTTGAACCAGTTGATACTGTTGGGGTTGGCAACATCAACAATAGCAACAATAGTAGTAAGAGGATGGTGGGTAATAATAATAATGACATGAAGTCTGGGGGTAAATATCTGGACTTTGAGTTCTTTTAA 2301 0.4615 MERVAEPKVLPRSLPVLVEVSNAHTDAIREAGQRLNGQDVSSVRGIPGREGNQFLKARDGPMKRLASIREVAQLSNARIVLVREDMGFDTRCQEPPSPAPTRMWKGKGSLPEAVELVPDIEKLKGGNDSFVETGPSSFAGASHPPEPVDTDLMRTVFVPIGQTKSEAGCLLKSVSLKGPFLEDLSIHVPAKKPSLAVVSPAESMVEESNEMGNLSSPFLGARASQNTENSPLAPDSEEKECVWDASLPPSGNVSPHSSIDSTSVVRTMSIANSCASTYRSDAVTSDGMLSLDRNCDSTKGSVRGDSLESAKTSASRASDSSGLSDDSNWSNITGSANKPHKGNDPRWKAILAIRTRDGILGMSHFRLLKRLGCGDIGSVYLSELSATRCFFAMKVMDKASLASRNKLTRAQTEREILQLLDHPFLPTLYTHFETDRFCCLVMEYCPGGDLHTLRQRQPGKHFSEYAARFYAAEVLLALEYLHMLGVVYRDLKPENVLVRDDGHIMLSDFDLSLRCAVSPTLIRNFDSDPSKRGGGAFCVQPACIEPSSVCIQPSCFMPRLFAQKNKKSRTPKAEPGMPSSTLPELVAEPTTARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLHELLYGKTPFKGSGNRATLFNVVGQQLRFPESPATSYASRDLIRGLLVKEPQHRLGVKRGATEIKQHPFFEGVNWALIRCSTPPEVPRPVECDLPAKFEPVDTVGVGNINNSNNSSKRMVGNNNNDMKSGGKYLDFEFF* 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1994 766 MobiDBLite consensus disorder prediction 290 338 - -
Gso9g1994 766 Gene3D Phosphorylase Kinase; domain 1 363 448 - -
Gso9g1994 766 SUPERFAMILY Protein kinase-like (PK-like) 347 719 IPR011009 -
Gso9g1994 766 MobiDBLite consensus disorder prediction 215 232 - -
Gso9g1994 766 ProSiteProfiles Protein kinase domain profile. 365 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1994 766 Pfam Protein kinase domain 594 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1994 766 Pfam Protein kinase domain 366 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1994 766 Gene3D Transferase(Phosphotransferase) domain 1 593 714 - -
Gso9g1994 766 PANTHER FLIPPASE KINASE 1-RELATED 76 766 - -
Gso9g1994 766 MobiDBLite consensus disorder prediction 732 751 - -
Gso9g1994 766 CDD STKc_phototropin_like 363 716 - -
Gso9g1994 766 SMART serkin_6 365 697 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1994 766 Gene3D Transferase(Phosphotransferase) domain 1 449 515 - -
Gso9g1994 766 ProSitePatterns Serine/Threonine protein kinases active-site signature. 486 498 IPR008271 GO:0004672|GO:0006468
Gso9g1994 766 MobiDBLite consensus disorder prediction 215 240 - -
Gso9g1994 766 MobiDBLite consensus disorder prediction 289 342 - -
Gso9g1994 766 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 76 766 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1994 Gso-Chr9 44385523 44390564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1994 1 766 AGC Kinase Gene Family AT2G44830 65.668 0.0 944
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso9g1994 Pkinase 8.8e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1994 - - gmx:100800019 1507.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g1806 18 50548285 50553423 Gso9g1994 9 44385523 44390564 GST
Gso7g0971 7 12047691 12052172 Gso9g1994 9 44385523 44390564 PCT
Gso3g0952 3 33488985 33493522 Gso9g1994 9 44385523 44390564 PCT