Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1986 ATGAGAATTGGTTCTCCTTCTTCATCTTCCTCCCGTTGTTCGCGTTTCTGGTCGTCGGCGCTCCGATCGAAGCGCCTCGTGTCGCCGGCGGAAAAGGCCGCCCGCGACAGCTCCGACCTCGGCCTCTCCCGCCGCCTCGGCGTTCTCGACCTCGTACTCCTCGGAATTGGCGCCTCCATCGGCGCCGGCATCTTCGTCGTCACCGGCACCGTCGCCCGCGACGCCGGACCTGGAGTAACAATAAGTTTTATACTTGCGGGAGCATCATGTGTTATAAATGCACTCTGTTATGCTGAACTAGCTACCCGATTTCCTGCTGTTGTTGGAGGAGCATATCTGTATGCGTACACAGCTTTTAATGAACTTACAGCTTTTCTTGTTTTTGGACAATTGATGCTTGACTATCACATTGGGGCAGCTAGTATAGCGAGAAGCCTAGCCAGTTATCTAATAAATATTCTAGAACTCTTCCCTGTTTTCAAAGATAACATTCCAAAATGGATTGGGCACGGTGAAGACATTGGAGATGTGCTATCCATCAATGTCTTGGCTCCAATTTTGCTAGTTCTTCTAACTTTTATTCTCTGTCGGGGTGTTCAAGAATCGTCTGTTGTGAATTCTCTTATGACAGTGACCAAGGTAATCATAGTTATCATCGTCATTTTTGCTGGAGCGTTTGAGGTTGACGTTTCCAACTGGTCTCCCTTTGCTCCAAATGGTTTAAAAGCCATATTTACAGGAGCTACCGTAGTCTTCTTTGCATATGTTGGATTTGATGCAGTTGCAAATTCTGCCGAAGAATCCAAGAGGCCTCAGCGGGATTTGCCAATAGGCATAATAGGAAGCCTCTTAATATGTATTGCATTGTACATTGGAGTATGCCTGGTGATTACTGGAATGGTTCCATACAATCTTCTAGGAGAAGATGCTCCTTTGGCTGAAGCTTTTACGTCTAAGGGATTAAAATTTGTTTCTATCCTGATTAGTGTTGGTGCTGTTGCTGGACTTACAACAACACTCCTTGTTGGTCTCTACGTTCAGTCTCGGCTATACCTTGGGCTTGGCAGGGATGGCTTACTACCCTTAATATTTGCTAAAGTCCACCCCAAACGCCACACCCCTATTCATTCTCAGATCTGGGTTGGCTTGGTTGCCAGTGTTTTGGCTGGGCTATTTAATGTGCATGTGCTCTCTCACATTCTTTCCGTTGGTACACTGACTGGCTATTCAGTTGTCTCAGCGTGTGTCGTCGTTCTTCGCTGGAAGGACAAGACAAATAGTCAAGTGTCATCTTCTGCTGAGCGGGAAGGCGTAATTTGCCTCATTGCTGTCGCCCTTTGTGGATTTGCTAGTGGGCTCTTGTATCGTTATGATGCTTCATTTATTTTTCTGATTCTGGCTTTAGTTATTGCAGCTGGTGCTTCTGCTGCTCTTGTTTTCCGCCAGGGTTATGCAGATGCACCAGGGTTTTCTTGCCCAGGGGTTCCCCTTCTGCCAAATATTTGCATCTTTTTTAACATGTTCTTATTTGCCCAGTTACATCATGAAGCATGGGTGAGATTTGTGATTCTTTGTGTTGTCATGGTTGGTGTTTATGCAGTATATGGCCAATATCATGCTAACCCCAGTGCAGAAGAGAATGTCTATCACAGGGCACCCGAGGAAGAAGCTCTATGA 1677 0.4627 MRIGSPSSSSSRCSRFWSSALRSKRLVSPAEKAARDSSDLGLSRRLGVLDLVLLGIGASIGAGIFVVTGTVARDAGPGVTISFILAGASCVINALCYAELATRFPAVVGGAYLYAYTAFNELTAFLVFGQLMLDYHIGAASIARSLASYLINILELFPVFKDNIPKWIGHGEDIGDVLSINVLAPILLVLLTFILCRGVQESSVVNSLMTVTKVIIVIIVIFAGAFEVDVSNWSPFAPNGLKAIFTGATVVFFAYVGFDAVANSAEESKRPQRDLPIGIIGSLLICIALYIGVCLVITGMVPYNLLGEDAPLAEAFTSKGLKFVSILISVGAVAGLTTTLLVGLYVQSRLYLGLGRDGLLPLIFAKVHPKRHTPIHSQIWVGLVASVLAGLFNVHVLSHILSVGTLTGYSVVSACVVVLRWKDKTNSQVSSSAEREGVICLIAVALCGFASGLLYRYDASFIFLILALVIAAGASAALVFRQGYADAPGFSCPGVPLLPNICIFFNMFLFAQLHHEAWVRFVILCVVMVGVYAVYGQYHANPSAEENVYHRAPEEEAL* 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1986 558 Pfam Amino acid permease 46 450 IPR002293 GO:0016020|GO:0022857|GO:0055085
Gso9g1986 558 Pfam C-terminus of AA_permease 490 539 IPR029485 -
Gso9g1986 558 PIRSF AA_transporter 30 558 - -
Gso9g1986 558 PANTHER INNER MEMBRANE TRANSPORTER YGJI-RELATED 8 549 - -
Gso9g1986 558 PANTHER CATIONIC AMINO ACID TRANSPORTER 9-RELATED 8 549 - -
Gso9g1986 558 Gene3D Amino acid/polyamine transporter I 42 474 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1986 Gso-Chr9 44275497 44280445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1986 8 482 Organic Solute Cotransporters AT1G05940 71.875 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1986 K03294 - gmx:100804988 987.252
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso18g2069 18 53646134 53651172 Gso9g1986 9 44275497 44280445 GST
Gso13g0483 13 16914470 16916875 Gso9g1986 9 44275497 44280445 PCT
Gso19g0119 19 1295440 1297664 Gso9g1986 9 44275497 44280445 PCT