Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1954 ATGGAGGGTAATGTCATCCTTAGCATTCCCCTAATTGAAGACCAAAACCAACACTGGAATGAAAACCAAAATTCTGGCACCAATATTATTGGCTCCACATCTTTCCTCAGCACTTGTTTCAATGGGCTCAATGCTTTGACAGGTGTTGGAATACTGTCAGTTCCATATGCTCTTGCATCTGGAGGGTGGTTAAGCTTGGTTCTTCTATTTGCTATTGCCGCTGCAGCATTTTACACAGGCACGTTGATTAAAAGATGTATGGACAAGAATTCTAACATTAAAACCTACCCAGATATAGGTGAGCTTGCATTTGGAAAGATAGGAAGGCTAATAATATCAGTGTCCATGTACACGGAGCTCTACTTGGTTTCAATAGGGTTCTTGATTCTGGAAGGCGATAACTTGAATAACTTGTGCCCCATTGAAGAGGTTCAGATAGCTGGCTTCGTAATTGGTGGGAAGCAACTGTTTGTGATATTGGTTGCCCTTATCATCTTGCCCACAGTTTGGTTGGACAACTTGAGTATGCTTTCTTATGTATCTGCAAGTGGAGTGTTTGCTTCTGCTGTAATCATCCTATCAATATCATGGACTGGAACATCTGATGGAGTTGGTTTTCATCAAAAGGGAACTCTTGTTAATTGGCGCGGAATCCCCACAGCTGTTAGCTTGTATGCCTTTTGCTATTGTGCACATCCCGTCTTCCCCACCTTGTACAATTCCATGACTAACAAACATCAGTTTTCTAATGTCCTATTAGTATGCTTTCTGTTAACCACTGTGGGTTATGCATCCATGGCTATAATTGGTTATCTAATGTTTGGTGCTGACGTTGAATCACAAGTAACATTAAACCTGCCACTGAACAAAGTAAGCTCAAAATTAGCAATATATACAACCTTGGTCAATCCCATATCCAAGTTCGCTTTGATGGCAACACCAATTACCAATGCTTTGAAAGATTTACTTCCAAGGGCGTACAAGAATAGAGCGACCAACATCTTAGTCAGCACTGTCTTGGTAATAAGCGCTACCATTGTTGCCCTCAGTGTTCCTTTCTTTGGGGATCTCATGTCTCTGGTTGGAGCGTTTTTAAGTGTCACAGCTTCTATTCTGCTTCCATGCTTGTGTTACTTGAAGATTTCAGGCACTTACAATGAATTTGGGTGTGAGACCATAGCCATAGTGACAATAATAGTAGCAGCTATAGCAATGGGAATATCTGGAACATATACCTCTGTCATGGAAATAGTACATCATTTGTAA 1266 0.4092 MEGNVILSIPLIEDQNQHWNENQNSGTNIIGSTSFLSTCFNGLNALTGVGILSVPYALASGGWLSLVLLFAIAAAAFYTGTLIKRCMDKNSNIKTYPDIGELAFGKIGRLIISVSMYTELYLVSIGFLILEGDNLNNLCPIEEVQIAGFVIGGKQLFVILVALIILPTVWLDNLSMLSYVSASGVFASAVIILSISWTGTSDGVGFHQKGTLVNWRGIPTAVSLYAFCYCAHPVFPTLYNSMTNKHQFSNVLLVCFLLTTVGYASMAIIGYLMFGADVESQVTLNLPLNKVSSKLAIYTTLVNPISKFALMATPITNALKDLLPRAYKNRATNILVSTVLVISATIVALSVPFFGDLMSLVGAFLSVTASILLPCLCYLKISGTYNEFGCETIAIVTIIVAAIAMGISGTYTSVMEIVHHL* 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1954 421 PANTHER OS05G0424000 PROTEIN-RELATED 35 418 - -
Gso9g1954 421 Pfam Transmembrane amino acid transporter protein 32 410 IPR013057 -
Gso9g1954 421 PANTHER AMINO ACID TRANSPORTER AVT1J 35 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1954 Gso-Chr9 43866191 43877823 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1954 20 418 Amino Acid or Auxin Permease AAAP Family AT3G28960 60.000 2.74e-177 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1954 K15015 - gmx:100794374 739.954