Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1931 ATGGCAGCTTGCATATTCACGGTGGCACAGGACGGAACCGCAGATTTCCAAACGGTGCAGGAGGCGATCGACGCCGTGCCGCTCGGCAACATTCGCCGGACGGTGATTCGGGTGTCGCCGGGAATCTACCGGCAACCGGTGTATGTCCCCAAGACCAAGAATTTCATCACTCTCGCCGCTCTCAGCCCTGAGGACACTGTGCTTACCTGGAACAACACTGCCACCGGAATCGATCACCACCAACCTGCGAGGGTGATAGGGACTGGGACGTTTGGTTGTGGAAGTACCATTGTGGAAGGGGAGGACTTTATTGCTGAGAATATTACATTTGAGAATTCTGCCCCTGAGGGTTCAGGGCAAGCAGTTGCAATTAGAGTAACGGCAGATCGATGTGCTTTCTACAATTGCAGGTTCCTTGGATGGCAGGACACACTATACTTACATTATGGTAAACAATATTTGAAAGATTGCTACATTGAAGGAAGTGTGGACTTCATCTTTGGCAATAGCACTGCTCTTTTGGAGCACTGTCATATCCACTGCAAGTCTGCAGGCTTCATAACCGCACAGAGCAGAAAATCATCACAGGAAACATCTGGTTATGTATTCTTAAGATGTGTTATCACAGGCAATGGAGGAAATTCATATGCATATCTTGGACGACCGTGGGGCCCTTTTGGAAGGGTGGTCTTTGCATACACTTACATGGATCAATGTATAAGGCATGTTGGCTGGGATAACTGGGGGAAAATGGAGAATGAAAGAAGTGCTTGCTTTTATGAATACAGGTGTTTTGGACCTGGATGCTGTCCATCAAAACGAGTAACGTGGTGTAGAGAATTGTTGGATGAAGAAGCTGAGCAGTTCCTCACGCATCCTTTCATTGATCCAGAACTAGAGAAACCTTGGCTTGCTCAAAGGATGGCCCTCAGGATTCCATATTCTGCTTGA 951 0.4784 MAACIFTVAQDGTADFQTVQEAIDAVPLGNIRRTVIRVSPGIYRQPVYVPKTKNFITLAALSPEDTVLTWNNTATGIDHHQPARVIGTGTFGCGSTIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHYGKQYLKDCYIEGSVDFIFGNSTALLEHCHIHCKSAGFITAQSRKSSQETSGYVFLRCVITGNGGNSYAYLGRPWGPFGRVVFAYTYMDQCIRHVGWDNWGKMENERSACFYEYRCFGPGCCPSKRVTWCRELLDEEAEQFLTHPFIDPELEKPWLAQRMALRIPYSA* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1931 316 Pfam Pectinesterase 7 296 IPR000070 GO:0030599|GO:0042545
Gso9g1931 316 SUPERFAMILY Pectin lyase-like 3 300 IPR011050 -
Gso9g1931 316 PANTHER PECTINESTERASE 1 315 - -
Gso9g1931 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 1 315 - -
Gso9g1931 316 ProSitePatterns Pectinesterase signature 2. 159 168 IPR033131 -
Gso9g1931 316 Gene3D - 4 311 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1931 Gso-Chr9 43630334 43634014 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1931 5 309 Carbohydrate Esterase AT5G47500 37.261 2.60e-69 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1931 K01051 - gmx:100786786 671.389