Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1925 ATGGGAGGTCCAGTGGCTTTTTTCATATTTTTGTTTAATCTGTCTTCTAAAAGGTTTTATGTTGCTGAAGTTCTCCTTGCCCAGGAGTATTTGCACATGCTAGGAGTTGTATATAGAGACTTGAAGCCAGAAAATATCCTGGTACGAGAAGATGGCCACATTATGCTTACGGATTTTAACTTGTCACTCAGATGTTGGGTCAATCCAATAGTGGTCAAGTCATCTTCAACAAGTGTGGATCCAACAAAGACGTCCAGCTCATGTTCGCAGGCTAACTGCATGCACCCTTTCTGTCTTCAACCAAATTGGCATGTCTCATGTACTCCTATTTTATTACCAAGTGGAGCAAAATCTCAAAAAATTAAGGCTGAAATAAGTGGTCAGGTTGGTCCACTGCCACAACTTATAGTGGAGCCTACCAATGCTCGATCAAACTCGTTTGTTGGAACCTATGAATATCTTGCTCCGGAAATCATAAAAGGTGAGGGTCATGGGAGTTCTGTAGATTGGTGGACTTTTGGTATACTATTGTTTGAACTTTTATACGGTATAACTCCATTCAAGGGCTCTACAAATGAGGATACATTAGCCAATGTTGTGTCACAGAGCCTTAAGTTCCCAGATACTCCCATAGTGAGTTTTTGA 645 0.4078 MGGPVAFFIFLFNLSSKRFYVAEVLLAQEYLHMLGVVYRDLKPENILVREDGHIMLTDFNLSLRCWVNPIVVKSSSTSVDPTKTSSSCSQANCMHPFCLQPNWHVSCTPILLPSGAKSQKIKAEISGQVGPLPQLIVEPTNARSNSFVGTYEYLAPEIIKGEGHGSSVDWWTFGILLFELLYGITPFKGSTNEDTLANVVSQSLKFPDTPIVSF* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1925 214 Gene3D Transferase(Phosphotransferase) domain 1 13 64 - -
Gso9g1925 214 ProSitePatterns Serine/Threonine protein kinases active-site signature. 36 48 IPR008271 GO:0004672|GO:0006468
Gso9g1925 214 PANTHER FLIPPASE KINASE 1-RELATED 15 214 - -
Gso9g1925 214 Pfam Protein kinase domain 144 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1925 214 Pfam Protein kinase domain 16 63 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1925 214 Gene3D Transferase(Phosphotransferase) domain 1 141 209 - -
Gso9g1925 214 SUPERFAMILY Protein kinase-like (PK-like) 12 208 IPR011009 -
Gso9g1925 214 ProSiteProfiles Protein kinase domain profile. 1 214 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1925 214 PANTHER SERINE/THREONINE-PROTEIN KINASE D6PKL1 ISOFORM X1 15 214 - -
Gso9g1925 214 SMART serkin_6 1 212 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1925 Gso-Chr9 43568913 43569930 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1925 12 214 AGC Kinase Gene Family AT2G36350 63.810 1.76e-89 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Gso9g1925 Pkinase 4.5e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1925 - - gsj:114368525 439.499