Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1918 ATGGGTTCGTCGACTAATGGTGGTGTGCCGCCAGGGTTTAGATTTCATCCAACGGATGAAGAGCTGCTTCATTACTACTTGAAGAAGAAGGTGTCCTTTCAGAAGTTTGACATGGATGTCATTAGAGAGGTCGACTTGAACAAGATGGAGCCTTGGGACTTGCAAGAAAGATGTAGAATTGGATCTACTCCACAAAACGAGTGGTATTTCTTCAGTCACAAGGATAGAAAGTACCCTACAGGTTCAAGGACTAATAGAGCAACGAACGCAGGGTTTTGGAAAGCAACAGGAAGAGACAAGTGCATTAGGAATAGCTTCAAGAAGATTGGAATGAGAAAAACCCTTGTGTTTTACAAAGGAAGAGCTCCTCATGGACAAAAGACTGATTGGATCATGCATGAGTACCGCCTAGAAGATGGCAATGATCCTCAAGGAAGTGCCAATGAAGATGGCTGGGTGGTGTGCAGAGTGTTCAAGAAGAAGAATTTATTCAAGATTGAAAATGAAGGTGGGTCTACACATAAACCAGATCACCAAATCAACAATTCTTCAAACACTAATGCACGGTCCTATAGAGAAAATCACTACTTACTACATCAACAGCAAAATCCTAGGAACTCATCAGGGCTTGAGCTTGATAAGCCTGAGCTGGCTCTCCATTACCCGCCGCCACACTTGCAAAACCCTCCATACTCACTCTTCCAATCCCAGCCTCTTCTTCAGACCCAAAAGCCTATGGTTTATGATTATTCATATACATCAGACACCCCTATCATGGCAAAGCAACTCATGACAAACCCTAGAGACTGTGAGAGCGGCAGTGATGGCCTAAGATATCAAGTTTCGGAGTCAGGTATGGAAGTTGGGTCGTGTGAACCAAATCAAGAAATGGGAACCGGAAGAGGTGAAGGAATAAACGAATGGGGTGTTCTTGATAGGCTAGTGACCTCTCATCTTGCTGGAAATGAGGACTCATCCAAAGGGGTCAGGTTTGAAGAGGCAAATCCACAGTCTGTCCACCAGATCAATCAACTTTCATTGAGGGGAGAGATGGACTTCTGGGCCTATGGAAAACAATGA 1080 0.4426 MGSSTNGGVPPGFRFHPTDEELLHYYLKKKVSFQKFDMDVIREVDLNKMEPWDLQERCRIGSTPQNEWYFFSHKDRKYPTGSRTNRATNAGFWKATGRDKCIRNSFKKIGMRKTLVFYKGRAPHGQKTDWIMHEYRLEDGNDPQGSANEDGWVVCRVFKKKNLFKIENEGGSTHKPDHQINNSSNTNARSYRENHYLLHQQQNPRNSSGLELDKPELALHYPPPHLQNPPYSLFQSQPLLQTQKPMVYDYSYTSDTPIMAKQLMTNPRDCESGSDGLRYQVSESGMEVGSCEPNQEMGTGRGEGINEWGVLDRLVTSHLAGNEDSSKGVRFEEANPQSVHQINQLSLRGEMDFWAYGKQ* 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1918 359 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Gso9g1918 359 Gene3D NAC domain 18 165 IPR036093 GO:0003677|GO:0006355
Gso9g1918 359 PANTHER PROTEIN BEARSKIN2-LIKE 5 270 IPR033519 -
Gso9g1918 359 ProSiteProfiles NAC domain profile. 9 160 IPR003441 GO:0003677|GO:0006355
Gso9g1918 359 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 5 270 - -
Gso9g1918 359 SUPERFAMILY NAC domain 8 160 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1918 Gso-Chr9 43526861 43530171 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1918 3 353 NAC Transcription Factor Family AT1G33280 54.875 1.11e-120 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Gso9g1918 NAM 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1918 - - gmx:100775746 763.066