Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1908 ATGTCGTCCACCACTCCTCCGCTGAATCCCGACCAATGCGATCCTGCGCCGGGGTCTCCGTCATCGCCCTCCGGCAAAGGTAAGCTCCAGAAGATTCCACCGATTCCGATTCGACGGAGAAAGGTATCATCATCATCATCAGCAGCAGCAGCAACAACAACACACGCAGGCAATGGCGATGAAGAGCAAGAGGAAGATTCTTCTTCCATCTTGCTCGCCTCGTCTCTTGGGCTCAATCACATTCGAACGCGTTCTTCGTCTTCTCCTCTTCGCTATTCCTCCTCCCTTGGCGCACCTTCCTTCTTGACACAGGATGCTGTCACTATTAATGATGTCAGACTTAGATCCAAATCTAATAATTCCCATCCAAGAAAAGACCTAGGGGGAAAAACTCATTTGGGTCAATCCAAATCGATGAGACCTCATTCGCAACTCATTCCCGTGTTAGAGGGTCATCATGCAGCTTTCACCAAAGAAATGCAATCCCCACGTTTTCAGGAAATCCTGCGACTTACCAGTGGACGCAAAAAGAGAAACCCTGATATTAAAAGCTTTTCCCATGAACTCAACTCCAAAGGAGTTAAACCATTTCCAATCTGGAAACATCGTGCCTTTGGTCACATGGAGGAAGTTATGGCGGCAATCAGAGCTAAGTTTGAAAAATTAAAGGAAGAAGTTGATTCTGACTTGGGTGGTTTTGCTGGAGATTTGGTGGGCATTCTTGAAAAGAATTTACTGTCTGATCGTGAATGGAAAGAGAGGTTGGAGGATCTGTTGGTTGTTACTCAACAATGCGCAAAGATGACTCCTACCCAGTTTTGGATCAAATGTGAATCTATTGTTCAAAACCTAGATGACAAACGTCAAGAATTACCAGTGGGGATACTCAAGCAAGCTCATACACGCCTACTGTTTATTCTCACTCGTTGCACTCGCCTAGTGCAATTCCAGAAGGAAAGCGGATATGAACAAGATCACATTCTGAGTCTTCACCAATTCAGCGATCTTGGGGTCTATCCTGAGCAAATTCTGAAGGCTGCACAGCAGAAATCCAGTATTCCACCTGCTGGACATGAGATGCCTGAGAAACAGTTAAAAATATCACATGGTAAAGAGAAAGACAAACCAATAACAGAACAAAGTCAAGCTGATCAACAGGTAAGTGTTGCGATTGACAATGGGGAGGTTTCTACAGCCAAAAGTATTGAATCAACTCCTGGAAGCTATAGAATGTCTTCTTGGAGAAAGCTTCCATCTGCTGCTGACAAAAGGCGAAAAGGTCAAGATGCTGTAGATTTCCCATCCAAAGGTGAACTGGATCACTTGCTAGTCAAAGATGAAAATTCTGAAAATTTGGATACTTTGTCATGTCATCCTGAACATTTACAATCATCATCAAGAGCGCAGAAGGTTTCTTGGGGATTGTGGGGAGACCAGCAAAATCTTACATACGAGGATTCAATGATATGCAGGATTTGTGAGGTTGAAATACCAATTGTACATGTGGAGGAGCATTCTAGAATATGCACAATTGCTGATAGATGTGATTTGAAAGGCTTAACTGTAAATGAACGGCTTGAAAGAGTTTCTGAAACCATTGAAAAAATACTGGAATCCTGGACACCAAAAAGCACACCAAAAAGCACTGATACTCCTGGAGAAAGCTTCGAGCTTGCTGCAGTGTCAACATCAAGTGTGCATGAGGAGTTCAATGATTTATCTCTAGAGAGAAATAACCTGACTTGTAGATGCTCTGAAGACATGCTTGACTCTACTGCGGAGCATGACAATACTTTTGTCATGGAGGATCTGAACCTTTCACCCGAAATATCATGTGAAGTACACATCTGCTTAAAACCTGATCATGGAACAAAGGTATCTTCTGCTGGAAGCTTGACACCGAGATCACCATTGGTAACACCACGAACCACACAGATAGAAATCTTACTAGGAGGACGAAGAACACTATCTGAACTTGAAAGTGGTGACCAGATAAGCAAGCTAGTTGAAATAGCCCGTGCTGTTGCAAATGTGAACAACTGTGACTACAGTGCTCTGGAGTATATGCTTGATCGCTTAGAAGACCTGAAATACTCTATTCAAGACAGAAAAGTGGATGCACTTATTGTGGAGACTTTTGGACGACGAATAGAGAAACTTTTGCAGGAGAAATATATATCTCTCTGTGGGCAGATAGAAGAAGAAAAGGTGGATTCATCAATTGGTATGGCTGATGAAGAGAGTTCAGTGGAAGATGATACAGTCCGTAGCCTTCGTGCTAGCCCTATTAATGCTTGTTCCAAGGACCGAACCTCTATTGAAGACTTTGAAATAATAAAACCAATAAGTAGGGGTGCATTTGGACGAGTTTTTCTTACCCGAAAAAGAGCAACTGGTGATTTATTTGCTATAAAGGTTCTCAAAAAGGCAGATATGATCCGTAAAAATGCAGTTCAAAGCATTTTGGCAGAGCGAGACATCCTTATATCGGTTCGAAACCCTTTTGTGGTCCGATTTTTCTACTCTTTCACATGTAGGGAAAATCTTTATCTAGTTATGGAGTATTTGAATGGTGGAGATCTTTATTCTATGTTGAGAAATCTAGGTTGCTTAGATGAAGATATGGCTCGTGTATATATTGCTGAAGTTGTTCTTGCATTGGAGTATTTGCATTCCTTAAATGTGATTCACAGAGACTTGAAGCCAGATAACTTACTGATTGGTCAAGATGGTCATATTAAGTTGACAGATTTTGGGCTCTCTAAGGTTGGTCTTATCAACAGCACAGATGATTTATCAGCGCCATCTTTTTCCAATAATGATTTCCTAGGAGACGATGAACCAAAACCTCGACATTCTTCAAAAAGGGAAGAGCGTCAAAAACAATCAGTAGTTGGCACCCCGGATTATTTGGCACCTGAAATACTTCTTGGCATGGGACATGCTGCAACAGCAGATTGGTGGTCCGTGGGTGTCATACTTTATGAGCTTCTTGTGGGTATTCCACCATTTAATGCAGAACATCCACAGCAAATTTTTGATAACATAATTAACAGAGACATACAATGGCCCAAGATTCCTGAGGAGATCAGCTTTGAAGCATATGATTTGATAAATAAATTATTGAATGAAAATCCAGTCCAAAGATTAGGTGCAACAGGAGCTACAGAAGTTAAACGCCACGCTTTCTTCAAGGATATTAATTGGGATACCCTTGCAAGACAGAAGGCTATGTTCATTCCAACGGCTGAAGCTCTCGATACAAGTTATTTTATGAGCCGGTACATTTGGAATCCCGAGGATGAACATTGTCTTGGAGGTAGTGATTTTGATGAGATTACTGAAACATGCAGCAGTGGTTCAGGCAGCGATTTATTAGAAGAAGATGGTGATGAATGTGGTAGTTTAGCAGAGTTCAGTGGTCCACCTCTTGAAGTGCAGTACTCATTTAGTAATTTCTCATTTAAGAACTTGTCTCAGCTGGCTTCTATCAATTATGATCTGGTGATTAAGAGCTCCAAGGAATCAACTCAATGA 3537 0.4173 MSSTTPPLNPDQCDPAPGSPSSPSGKGKLQKIPPIPIRRRKVSSSSSAAAATTTHAGNGDEEQEEDSSSILLASSLGLNHIRTRSSSSPLRYSSSLGAPSFLTQDAVTINDVRLRSKSNNSHPRKDLGGKTHLGQSKSMRPHSQLIPVLEGHHAAFTKEMQSPRFQEILRLTSGRKKRNPDIKSFSHELNSKGVKPFPIWKHRAFGHMEEVMAAIRAKFEKLKEEVDSDLGGFAGDLVGILEKNLLSDREWKERLEDLLVVTQQCAKMTPTQFWIKCESIVQNLDDKRQELPVGILKQAHTRLLFILTRCTRLVQFQKESGYEQDHILSLHQFSDLGVYPEQILKAAQQKSSIPPAGHEMPEKQLKISHGKEKDKPITEQSQADQQVSVAIDNGEVSTAKSIESTPGSYRMSSWRKLPSAADKRRKGQDAVDFPSKGELDHLLVKDENSENLDTLSCHPEHLQSSSRAQKVSWGLWGDQQNLTYEDSMICRICEVEIPIVHVEEHSRICTIADRCDLKGLTVNERLERVSETIEKILESWTPKSTPKSTDTPGESFELAAVSTSSVHEEFNDLSLERNNLTCRCSEDMLDSTAEHDNTFVMEDLNLSPEISCEVHICLKPDHGTKVSSAGSLTPRSPLVTPRTTQIEILLGGRRTLSELESGDQISKLVEIARAVANVNNCDYSALEYMLDRLEDLKYSIQDRKVDALIVETFGRRIEKLLQEKYISLCGQIEEEKVDSSIGMADEESSVEDDTVRSLRASPINACSKDRTSIEDFEIIKPISRGAFGRVFLTRKRATGDLFAIKVLKKADMIRKNAVQSILAERDILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDLYSMLRNLGCLDEDMARVYIAEVVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKVGLINSTDDLSAPSFSNNDFLGDDEPKPRHSSKREERQKQSVVGTPDYLAPEILLGMGHAATADWWSVGVILYELLVGIPPFNAEHPQQIFDNIINRDIQWPKIPEEISFEAYDLINKLLNENPVQRLGATGATEVKRHAFFKDINWDTLARQKAMFIPTAEALDTSYFMSRYIWNPEDEHCLGGSDFDEITETCSSGSGSDLLEEDGDECGSLAEFSGPPLEVQYSFSNFSFKNLSQLASINYDLVIKSSKESTQ* 1179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1908 1178 Gene3D Phosphorylase Kinase; domain 1 774 1091 - -
Gso9g1908 1178 MobiDBLite consensus disorder prediction 417 433 - -
Gso9g1908 1178 ProSiteProfiles AGC-kinase C-terminal domain profile. 1065 1165 IPR000961 GO:0004674|GO:0005524|GO:0006468
Gso9g1908 1178 Pfam Protein kinase domain 776 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1908 1178 ProSitePatterns Serine/Threonine protein kinases active-site signature. 895 907 IPR008271 GO:0004672|GO:0006468
Gso9g1908 1178 SMART serkin_6 776 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1908 1178 CDD STKc_MAST_like 782 1069 - -
Gso9g1908 1178 MobiDBLite consensus disorder prediction 937 964 - -
Gso9g1908 1178 MobiDBLite consensus disorder prediction 944 963 - -
Gso9g1908 1178 PANTHER SERINE/THREONINE PROTEIN KINASE IRE-RELATED 25 1177 - -
Gso9g1908 1178 MobiDBLite consensus disorder prediction 117 131 - -
Gso9g1908 1178 MobiDBLite consensus disorder prediction 113 140 - -
Gso9g1908 1178 ProSiteProfiles Protein kinase domain profile. 776 1064 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1908 1178 MobiDBLite consensus disorder prediction 40 57 - -
Gso9g1908 1178 Gene3D Transferase(Phosphotransferase) domain 1 860 1082 - -
Gso9g1908 1178 PANTHER SERINE/THREONINE-PROTEIN KINASE 25 1177 - -
Gso9g1908 1178 MobiDBLite consensus disorder prediction 366 433 - -
Gso9g1908 1178 MobiDBLite consensus disorder prediction 380 412 - -
Gso9g1908 1178 SUPERFAMILY Protein kinase-like (PK-like) 773 1093 IPR011009 -
Gso9g1908 1178 MobiDBLite consensus disorder prediction 1 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1908 Gso-Chr9 43453204 43462981 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1908 29 1178 AGC Kinase Gene Family AT5G62310 63.582 0.0 1438
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_MAST Gso9g1908 Pkinase 1.7e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1908 - - gmx:100817975 2248.4