Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1904 ATGGCATTGCACGATCTCGTTGGAAGTTCAAGATCTTCCCAAAATGTTTTTAGAATACTAGTAACCGTTCTACTCATCTTAACCTTTGTCCAATTAGCAGCATCTGCGTCGACCGCTACCGATTCCCTCAAAGCCTACAAAAAGTTCATAAAAGACAAGTGCAATTCAACCACTTACCCAAAAGTTTGCTACAAGTCTCTATACCCTTATGCATCACAAATAAAAAGAAACAGCGTAACACTGACCAAATTGTCAATTCACGTGGCTCTAAAAGCAGCCAAGAGTGCAAACAGCACATTGACGAAGCTGTCCAATTCGAAGGGGAAGCTGACACACGGAGAAACGTCGGTGATTGCGGATTGCAGAGAGAACATTGATGAGACGTTGGATATGCTTGAGCAATCTGCTGAAGGGCTGGCACATTTGAATGGCGCATCTACCGCTGATGAGAAATTCCAATGGGACAGCATAAAGACATGGATGAGTGCCGCCATAACAGATGAGGGTACATGCACCGATGAGTTTGACGAAATACAAGTGCGTCCTTCACTGCAGGAGAATATCAAAACCACCGTTTTTAACGTTTCTTGGTTAACTACCAATGCCTTGGCTCTCGTCAACAGGCTTTACTAA 633 0.4376 MALHDLVGSSRSSQNVFRILVTVLLILTFVQLAASASTATDSLKAYKKFIKDKCNSTTYPKVCYKSLYPYASQIKRNSVTLTKLSIHVALKAAKSANSTLTKLSNSKGKLTHGETSVIADCRENIDETLDMLEQSAEGLAHLNGASTADEKFQWDSIKTWMSAAITDEGTCTDEFDEIQVRPSLQENIKTTVFNVSWLTTNALALVNRLY* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1904 210 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 11 210 - -
Gso9g1904 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 47 209 IPR035513 -
Gso9g1904 210 SMART PMEI_2 45 205 IPR006501 GO:0004857
Gso9g1904 210 Coils Coil 203 210 - -
Gso9g1904 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 44 209 IPR035513 -
Gso9g1904 210 CDD PMEI-like_3 54 209 - -
Gso9g1904 210 TIGRFAM PME_inhib: pectinesterase inhibitor domain 23 209 IPR006501 GO:0004857
Gso9g1904 210 Pfam Plant invertase/pectin methylesterase inhibitor 48 205 IPR006501 GO:0004857
Gso9g1904 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 11 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1904 Gso-Chr9 43434523 43435457 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1904 50 209 Carbohydrate Esterase AT1G53830 28.125 3.88e-14 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1904 - - gmx:100776299 394.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1904 9 43434523 43435457 Gso9g1904 9 43434523 43435457 ECH