Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1903 ATGGAGGCCATTTGTTCCAAGCACCTTATGACATCCCTTGTCATAATTCTTGCTTCTAGTTTGACCTTATCACAGGGTGCCAAGAAAGGCAGTGACAGTGAAAGGCCATACCAAGAAGCGAGCACGGTGTTCATTAGAACATCTTGCAGCTCCACGACCTATCCAAGACTCTGCTACAGCTCCTTAGTGAAGCATGCAGACTTGATCCAAACAAACCGTGTGGTTCTGACAGGCACAGCCCTGAATGTGACCCTTGCGTCTGCCAAGTCGACCTCGGCAATGATGTCGACGCTGGCAAAGAGGCAAGGCCTGAAGCCAAGAGAGGTTGCAGCGATGAAGGACTGTGTGGAGGAGTTGGCGGACTCTGTTGATGAGCTCAGAAGGTCTATTTCTGAGATGGCTCAACTAACACCCTCCAATTTTGAGATGACAATGAGTGACGTAGAAACGTGGGTGAGTGCTGCTTTGACCGATGAGAGCACGTGCACCGATGGCTTCCAAGAGACGGCTGCTGCTGGTGGTTCAAATGTAAAGAACACGGTGAGAGGCCAAATTCTTCAGGTGGCTCAATTGACTAGTAATGCCTTGGCTTTGATAAATCAGCTGGCCAATTCTCATGCTTAA 624 0.4936 MEAICSKHLMTSLVIILASSLTLSQGAKKGSDSERPYQEASTVFIRTSCSSTTYPRLCYSSLVKHADLIQTNRVVLTGTALNVTLASAKSTSAMMSTLAKRQGLKPREVAAMKDCVEELADSVDELRRSISEMAQLTPSNFEMTMSDVETWVSAALTDESTCTDGFQETAAAGGSNVKNTVRGQILQVAQLTSNALALINQLANSHA* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1903 207 SMART PMEI_2 40 198 IPR006501 GO:0004857
Gso9g1903 207 Gene3D Invertase/pectin methylesterase inhibitor family protein 40 204 IPR035513 -
Gso9g1903 207 Coils Coil 116 136 - -
Gso9g1903 207 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 44 202 IPR035513 -
Gso9g1903 207 CDD PMEI-like_3 47 204 - -
Gso9g1903 207 PANTHER 21 KDA PROTEIN-LIKE 12 202 - -
Gso9g1903 207 Pfam Plant invertase/pectin methylesterase inhibitor 44 198 IPR006501 GO:0004857
Gso9g1903 207 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 202 - -
Gso9g1903 207 TIGRFAM PME_inhib: pectinesterase inhibitor domain 10 202 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1903 Gso-Chr9 43428181 43429147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1903 23 205 Carbohydrate Esterase AT3G14310 32.258 9.72e-23 93.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1903 - - gmx:100305537 391.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1903 9 43428181 43429147 Gso9g1903 9 43428181 43429147 ECH