Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1889 ATGAAACATTTTCTTCTCTTTCTCATCACATTCTCCTTCCTCTGCCAAACACACCTACTCATACTTCTCTCTGCCACAACAACCCTGCCCCTCCAACTTGTTGCTCTCCTCTCCATAAAATCATCCCTCCTAGACCCTCTCAATAACCTCCATGACTGGGACCCCTCCCCCTCCCCCACCTTCTCCAACTCCAATCCCCAACACCCCATATGGTGTTCCTGGAGAGCCATCACATGCCACCCCAAAACATCACAAATCACCACCCTAGACCTCTCCCACCTCAATCTCTCCGGCACTATCTCCCCCCAAATCCGCCACCTTTCCACCTTAAACCACCTTAACCTCAGTGGAAATGACTTCACCGGGAGTTTCCAATACGCCATTTTCGAACTAACAGAACTGAGAACACTAGACATCAGCCACAACTCCTTCAATTCAACCTTTCCACCGGGTATATCAAAACTCAAATTCCTCAGGCACTTCAACGCCTACAGCAACAGCTTCACCGGCCCTCTCCCCCAAGAGTTAACCACCCTTCGTTTCATCGAACAACTGAACCTCGGCGGAAGCTACTTCAGCGACGGGATTCCACCAAGCTATGGCACTTTCCCGAGACTCAAGTTTCTAGACTTAGCCGGTAACGCCTTCGAAGGTCCACTCCCACCCCAACTAGGCCACTTGGCTGAACTAGAACACTTGGAAATTGGATACAACAATTTCTCAGGAACACTACCCTCAGAACTGGGATTGCTTCCTAACCTCAAATACTTGGACATCTCAAGCACTAACATTTCAGGGAACGTGATTCCGGAGCTGGGAAACCTCACCAAGCTGGAGACACTTCTGCTGTTCAAGAACAGGTTAACAGGGGAAATCCCATCAACCTTAGGAAAATTGAAGTCACTTAAAGGCCTTGATCTGTCAGACAACGAACTCACTGGGCCAATCCCCACTCAAGTCACCATGCTAACCGAGCTAACCATGCTCAACCTAATGAACAACAACCTCACAGGGGAAATACCACAGGGGATTGGAGAACTACCTAAGCTAGACACTCTGTTCCTCTTCAACAACTCACTCACTGGAACACTCCCTCGACAACTTGGCTCCAACGGGTTACTGCTGAAACTAGATGTTTCCACAAACTCACTCGAAGGTCCAATCCCTGAAAATGTGTGCAAAGGTAACAAGCTCGTGAGACTCATACTCTTCCTCAACAGATTCACCGGTTCTCTCCCACATTCCCTCGCCAACTGCACCTCACTCGCTAGGGTTCGCATCCAAAACAATTTTCTCAACGGTTCAATCCCCCAAGGCCTCACGCTCCTCCCTAACCTAACATTTCTAGACATCAGCACCAACAACTTCCGTGGTCAAATTCCGGAACGCTTAGGTAATTTGCAGTACTTCAACATGTCCGGAAACTCCTTCGGAACCTCCTTACCGGCCTCTATTTGGAATGCTACTGATCTTGCGATCTTCTCTGCTGCTTCCTCGAACATCACTGGTCAAATTCCTGATTTCATAGGGTGTCAGGCATTGTATAAGCTCGAACTGCAGGGAAATTCCATCAACGGTACGATTCCGTGGGACATTGGACACTGCCAGAAGCTCATTTTACTGAATCTGAGTCGAAACTCACTCACCGGAATCATTCCCTGGGAAATCTCCATTCTCCCTTCCATCACCGACGTTGATCTCTCTCACAATTCCCTCACCGGAACCATTCCTTCGAACTTCAACAACTGCTCCACGCTCGAGAATTTCAACGTTAGCTTCAACTCCCTCATCGGTCCAATTCCTTCCTCCGGCATTTTCCCGAACCTACATCCTTCCTCCTACGCCGGCAACCAGGGGCTCTGCGGCGGCGTGTTGGCCAAACCCTGCGCCGCCGACGCCCTCGCCGCCTCCGATAACCAGGTCGACGTCCACCGCCAGCAGCCGAAGAGAACCGCCGGTGCAATAGTCTGGATCGTCGCGGCGGCGTTCGGTATCGGCCTCTTCGTGCTCGTCGCCGGCACGCGCTGCTTTCACGCGAACTACAACCACAGGTTCGGCGACGAGGTAGGGCCGTGGAAGTTAACGGCGTTCCAGCGTTTGAATTTCACGGCAGAGGACGTGCTGGAGTGTTTGTCGTTGTCCGATAAGATACTGGGGATGGGATCCACGGGAACGGTTTACAGAGCAGAAATGCCAGGTGGCGAGATCATAGCGGTTAAGAAGCTGTGGGGGAAGCAGAAGGAGAATAATATCAGACGGAGGAGAGGGGTTCTGGCTGAGGTGGAGGTGTTGGGAAACGTGAGGCACAGGAATATCGTGAGGTTGTTAGGGTGCTGCAGCAACAATGAGTGCACCATGCTGCTTTACGAGTACATGCCCAATGGCAATTTGGATGATTTGTTGCATGCCAAAAATAAAGGAGATAATTTAGTTGCTGATTGGTTCAATAGGTACAAGATCGCCTTGGGTGTGGCTCAGGGAATTTGTTATCTCCACCATGACTGTGATCCGGTAATCGTACACCGTGATCTCAAACCTAGTAACATATTATTGGACGCTGAGATGAAGGCCAGAGTGGCAGATTTTGGTGTTGCCAAGTTGATTCAGACCGATGAGTCCATGTCTGTCATTGCCGGTTCCTATGGCTACATTGCTCCAGAATATGCTTACACCCTTCAAGTCGATGAGAAGAGTGACATTTACAGCTACGGAGTGGTGTTGATGGAGATCCTTAGCGGAAAACGTTCGGTGGATGCAGAATTTGGCGATGGGAACAGCATTGTTGATTGGGTTAGGTCTAAGATAAAGTCAAAAGATGGCATTAATGACATATTGGACAAGAATGCAGGGGCAGGGTGCACCTCAGTGAGAGAAGAGATGATACAAATGCTTAGGATTGCATTGCTTTGCACCAGTAGAAACCCAGCGGATAGGCCTTCTATGAGGGATGTTGTGTTGATGCTGCAAGAGGCCAAGCCAAAGAGGAAATTGCTTGATAGTGTTATTGTGGGTCGATGTGCTGGGGACAATGTGGTTGGTGGTGGTGGGGGTGACATTCCTTTGCCACAAAAGCCAACCGCGGATCAATGCTAA 3093 0.4985 MKHFLLFLITFSFLCQTHLLILLSATTTLPLQLVALLSIKSSLLDPLNNLHDWDPSPSPTFSNSNPQHPIWCSWRAITCHPKTSQITTLDLSHLNLSGTISPQIRHLSTLNHLNLSGNDFTGSFQYAIFELTELRTLDISHNSFNSTFPPGISKLKFLRHFNAYSNSFTGPLPQELTTLRFIEQLNLGGSYFSDGIPPSYGTFPRLKFLDLAGNAFEGPLPPQLGHLAELEHLEIGYNNFSGTLPSELGLLPNLKYLDISSTNISGNVIPELGNLTKLETLLLFKNRLTGEIPSTLGKLKSLKGLDLSDNELTGPIPTQVTMLTELTMLNLMNNNLTGEIPQGIGELPKLDTLFLFNNSLTGTLPRQLGSNGLLLKLDVSTNSLEGPIPENVCKGNKLVRLILFLNRFTGSLPHSLANCTSLARVRIQNNFLNGSIPQGLTLLPNLTFLDISTNNFRGQIPERLGNLQYFNMSGNSFGTSLPASIWNATDLAIFSAASSNITGQIPDFIGCQALYKLELQGNSINGTIPWDIGHCQKLILLNLSRNSLTGIIPWEISILPSITDVDLSHNSLTGTIPSNFNNCSTLENFNVSFNSLIGPIPSSGIFPNLHPSSYAGNQGLCGGVLAKPCAADALAASDNQVDVHRQQPKRTAGAIVWIVAAAFGIGLFVLVAGTRCFHANYNHRFGDEVGPWKLTAFQRLNFTAEDVLECLSLSDKILGMGSTGTVYRAEMPGGEIIAVKKLWGKQKENNIRRRRGVLAEVEVLGNVRHRNIVRLLGCCSNNECTMLLYEYMPNGNLDDLLHAKNKGDNLVADWFNRYKIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDAEMKARVADFGVAKLIQTDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILSGKRSVDAEFGDGNSIVDWVRSKIKSKDGINDILDKNAGAGCTSVREEMIQMLRIALLCTSRNPADRPSMRDVVLMLQEAKPKRKLLDSVIVGRCAGDNVVGGGGGDIPLPQKPTADQC* 1031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1889 1030 SMART serkin_6 712 992 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1889 1030 Pfam Leucine rich repeat 277 336 IPR001611 GO:0005515
Gso9g1889 1030 Pfam Leucine rich repeat 513 572 IPR001611 GO:0005515
Gso9g1889 1030 SUPERFAMILY L domain-like 317 621 - -
Gso9g1889 1030 Gene3D Phosphorylase Kinase; domain 1 695 791 - -
Gso9g1889 1030 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE TDR ISOFORM X3 2 1015 - -
Gso9g1889 1030 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Gso9g1889 1030 Gene3D Ribonuclease Inhibitor 79 344 IPR032675 -
Gso9g1889 1030 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 2 1015 - -
Gso9g1889 1030 ProSitePatterns Protein kinases ATP-binding region signature. 718 741 IPR017441 GO:0005524
Gso9g1889 1030 SMART LRR_typ_2 464 488 IPR003591 -
Gso9g1889 1030 SMART LRR_typ_2 347 371 IPR003591 -
Gso9g1889 1030 SMART LRR_typ_2 131 155 IPR003591 -
Gso9g1889 1030 SMART LRR_typ_2 559 582 IPR003591 -
Gso9g1889 1030 SMART LRR_typ_2 323 345 IPR003591 -
Gso9g1889 1030 SMART LRR_typ_2 275 299 IPR003591 -
Gso9g1889 1030 SMART LRR_typ_2 227 251 IPR003591 -
Gso9g1889 1030 ProSiteProfiles Protein kinase domain profile. 712 998 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1889 1030 Gene3D Ribonuclease Inhibitor 345 636 IPR032675 -
Gso9g1889 1030 SUPERFAMILY RNI-like 89 409 - -
Gso9g1889 1030 Gene3D Transferase(Phosphotransferase) domain 1 792 1002 - -
Gso9g1889 1030 SUPERFAMILY Protein kinase-like (PK-like) 715 988 IPR011009 -
Gso9g1889 1030 Pfam Protein kinase domain 715 985 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1889 Gso-Chr9 43288778 43293010 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1889 4 1009 Receptor kinase-like Gene Family AT1G08590 42.636 0.0 760
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Gso9g1889 Pkinase 4.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1889 - - gmx:100813189 2018.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso9g1889 9 43288778 43293010 Gso9g1889 9 43288778 43293010 ECH