Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1850 ATGGGGGAATATTCATGCGCGTTGTGCAAGAAGAGGGCGATGATGCTGTGCGACTCGGACCAGGCTAAGCTATGCTGGGAGTGCGACGAGAAAGTTCACAGCGCGAATTTCTTGGTGGCTAAGCATTCGCGTGTGCTTCTCTGTCGTTTATGCCATTCCCCGACTCCGTGGAAGGCCTCCGGCACCAAACTCATGCTCACGGTGTCGTTTTGTCAGCGTTGCGTCGCGCATCGACACGTGAGCTTAACCGTGCATCCATATCCATCATATGGATATCAATCTAGTAATAATAATGATGATGTTGACCTCGATGTTGATGATGGTATCGATGATTCGGATGAAAGGGAAAGTCATCAAGTCATGTCTAGTTCTGCCACCTCACCATTCAAGCGACTAAGAAATAACTCTTTTTCTGTCGATTCCAATGACGAGACAGTGAGTTCTTCATCTGAGATGTTTAGTGCTACATGGCCCGATGATGATGAATCAACAACTTCTCTCTCCGTATTGAAGAGGCACCGAGATGATCAACCAAATTATTGA 543 0.4696 MGEYSCALCKKRAMMLCDSDQAKLCWECDEKVHSANFLVAKHSRVLLCRLCHSPTPWKASGTKLMLTVSFCQRCVAHRHVSLTVHPYPSYGYQSSNNNDDVDLDVDDGIDDSDERESHQVMSSSATSPFKRLRNNSFSVDSNDETVSSSSEMFSATWPDDDESTTSLSVLKRHRDDQPNY* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1850 180 MobiDBLite consensus disorder prediction 93 180 - -
Gso9g1850 180 CDD Bbox1_BBX-like 6 47 - -
Gso9g1850 180 MobiDBLite consensus disorder prediction 119 164 - -
Gso9g1850 180 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 5 174 - -
Gso9g1850 180 SMART bboxneu5 1 47 IPR000315 GO:0008270
Gso9g1850 180 PANTHER OS08G0178800 PROTEIN 5 174 - -
Gso9g1850 180 MobiDBLite consensus disorder prediction 165 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1850 Gso-Chr9 42918472 42919406 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1850 1 78 C2C2-CO-like Transcription Factor Family AT5G54470 61.538 1.45e-28 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Gso9g1850 zf-B_box 3.2e-06 No_clan