Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1847 ATGGCCAAAAAGAAGAGCTGGTTTAGTCTGGTGAAGAGGCTCTTTATATGGGACACACATTCCACACAAGATAAGGTGAAGGAGAAAAGAAGGAAATGGATATTTGGAAGGCTAAAGAGCAAGAGAATACCTTCAATTAAAGCTCCACTACCATCAAAAGAAACAATACTAAGTGAAGCAGAGGAAGAACAGAGCAAGCATGCTTTAACAGTGGCCATTGCCTCAGCAGCAGCTGCTGAAGCTGCTGTTACTGTTGCTCATGCTGCTGCGGAGGTTGTTCGCCTCACTGGGGAACGCAAGGAAAACTCAGAAGAATCTCAACCTGTTAAAACTAGGAATGGTGCTCCTCAATCCACATACCAGTGCCAGAGGGAGATTAAAGAATCTGCTGCCGCCATCAAAATTCAAACTGCATTTCGGGGTTACCTGGCAAAGAAGGCTTTGAGGGCATTGAAGGGAATAGTGAAGCTTCAAGCTATCATTCGTGGCCGAGCAGTAAGACGCCAAGCTATGAGTACTCTTAAGTGCTTACAGTCCATTGTGAGTATCCAGTCACAGGTCTGTGCAAGGAGGCTCCAAATGGTTGAAGGGAGATGTGATTACTCTGAAAATGAAGACATGCAAGATTCTAAAGACAAAATAATTAGGATGGACTCGAACAGTGAAAGAAAGTGGGATGAAAGCACTGTATTGAAGGAAGAGGTAGACACCTCCTGCACTAGCAAGAAAGAAACAATTCTCAAGAGAGAAAGAATAAAAGAATACTCATTTAACCATAGAAGGTCAGCAGAGTCAGAAAGAAGTAAGGTAAATGGAAGATGGAGGTACTGGCTAGAGCAGTGGGTAGATACACAACTTTCAAAGAGTAAAGAGCTTGAAGATTTAGACTCAGTTTTTAGCTCACATTCTAGGGCTGGGGAGGAATATGGAGGAAGACAACTTAAGCTGACAAGTATTAACAATCAGAGACAAAGTCCAGTTGAAGGATTGGATTCTCCTACACTTGGTTCAAGAAGATCTTTTCCTCATAGGAGGCAGTGTTCAGTGGGAGAAGACCACTCATTTTCAAGCTCTCCTGCAACTCCAGCATACATGGCTGCAACAGAATCAGCAAAAGCAAAAGCAAGATCAACAAGCTCCCCAAAAATAAGGACTGGGGGGAATGTGGACATGAACTCTGATAGCTATTCACCATGCAAGAAAAAGCTATCAATTTCATCTTCTATTAACAGTGAAGTGCTTAATAGTGGTAGGATGGGCAAGCTCAGTAGTAGTAACCAGCAGCAAAGATCTCCAAGCTTTAAGGGCCTTTCAGTGCCTATAAAATCAAGCAGAACTACTATCAAGGATCTCAGTATTAATTCAGATTGCTCACTGCCTAATTGGGATCGACAAGCTTCCTTCAAATGA 1410 0.427 MAKKKSWFSLVKRLFIWDTHSTQDKVKEKRRKWIFGRLKSKRIPSIKAPLPSKETILSEAEEEQSKHALTVAIASAAAAEAAVTVAHAAAEVVRLTGERKENSEESQPVKTRNGAPQSTYQCQREIKESAAAIKIQTAFRGYLAKKALRALKGIVKLQAIIRGRAVRRQAMSTLKCLQSIVSIQSQVCARRLQMVEGRCDYSENEDMQDSKDKIIRMDSNSERKWDESTVLKEEVDTSCTSKKETILKRERIKEYSFNHRRSAESERSKVNGRWRYWLEQWVDTQLSKSKELEDLDSVFSSHSRAGEEYGGRQLKLTSINNQRQSPVEGLDSPTLGSRRSFPHRRQCSVGEDHSFSSSPATPAYMAATESAKAKARSTSSPKIRTGGNVDMNSDSYSPCKKKLSISSSINSEVLNSGRMGKLSSSNQQQRSPSFKGLSVPIKSSRTTIKDLSINSDCSLPNWDRQASFK* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1847 469 PANTHER IQ-DOMAIN 5-RELATED 5 455 - -
Gso9g1847 469 Pfam IQ calmodulin-binding motif 130 149 IPR000048 GO:0005515
Gso9g1847 469 ProSiteProfiles IQ motif profile. 128 156 IPR000048 GO:0005515
Gso9g1847 469 PANTHER IQ-DOMAIN 11 5 455 - -
Gso9g1847 469 Pfam Protein of unknown function (DUF4005) 351 428 IPR025064 -
Gso9g1847 469 ProSiteProfiles IQ motif profile. 152 179 IPR000048 GO:0005515
Gso9g1847 469 SMART iq_5 127 149 IPR000048 GO:0005515
Gso9g1847 469 MobiDBLite consensus disorder prediction 416 440 - -
Gso9g1847 469 MobiDBLite consensus disorder prediction 372 401 - -
Gso9g1847 469 MobiDBLite consensus disorder prediction 301 401 - -
Gso9g1847 469 MobiDBLite consensus disorder prediction 314 331 - -
Gso9g1847 469 MobiDBLite consensus disorder prediction 96 119 - -
Gso9g1847 469 Gene3D - 126 178 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1847 Gso-Chr9 42890265 42893900 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1847 1 469 IQD Protein Family AT5G13460 45.885 1.28e-111 335
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1847 - - gmx:100800192 877.856