Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1843 ATGAACTGGGATGATGACGAGCGCATACACTTAATCAATCTTCTTAACGACTGTGTCAGGCTTACTGAATTAGGCAACTTCAATGATGCATATATTGCACTCTACCATCTCTCTCAACTTGCTTCCTCTGATGGTGATTCCATGCAACGCGTTGCCACTTATTTCATTGAGGCACTAGCCTATTGCCAAGTCGTCAAAAATTTGAGTGGTGTACCCAAAGTTCTCCATTTGGTAAAAACACTATCAACTCCCGAACAACAATTAGTCAAGAAATTATTCTTTGATTTCTACCCCTTCATAAAGATCGCACACACCATCACAAATCAGGCCATTATTGAAGCCATGAAAGGGGAAACATCGATTAATGTCCTTGATCTCAGTCCATCTTATAATGCTCTTCAGTGGACTAATCTCATGAATTTGGAGAATCTTGACCCTGAGAAATTGCCTATCAAGAAAGGTGAGCCTCTTGCTATTAGTTCTGTGCTTCAGCTTCACTCTCTTCTTGCCACCGACGATGATAATGAGATGGTCAAAATGAGGAGGGGTACTGGTCAAAGGATGTTTCCTGAGATGCTTGCCAAACCCAAAAAGAAGAAGGTGGTGAATCCAAGTCCTGATTCAGCACTCTCACCTTTCTCTCCATGTCCATCACATAAGATGGAGTCTTTTCTCTATGGCCTGTGGAAGCTCCAACCAAAAGTGATGGTGATTACTGAGCAAGAGTCAAATGTTAATAATGGGTCCAGTTTGACAAAGAGGGTGGGAAGTGCTTTGAAATTTTATAGCACACTGTTTGATTGCTTGGAAGCTTCCACTTCCAGAACATCAGAAAGGAGAAGCCTAATGGAGAAGATGTTACTTGGGGAAGAGATAAGGAACATTGTTGCATGTGAAGGAGTTGAGAGAAAGGAAAGGCATGAGAAACTAGTGACATGGATCCCTAAGGCTTGA 954 0.4193 MNWDDDERIHLINLLNDCVRLTELGNFNDAYIALYHLSQLASSDGDSMQRVATYFIEALAYCQVVKNLSGVPKVLHLVKTLSTPEQQLVKKLFFDFYPFIKIAHTITNQAIIEAMKGETSINVLDLSPSYNALQWTNLMNLENLDPEKLPIKKGEPLAISSVLQLHSLLATDDDNEMVKMRRGTGQRMFPEMLAKPKKKKVVNPSPDSALSPFSPCPSHKMESFLYGLWKLQPKVMVITEQESNVNNGSSLTKRVGSALKFYSTLFDCLEASTSRTSERRSLMEKMLLGEEIRNIVACEGVERKERHEKLVTWIPKA* 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1843 317 Pfam GRAS domain family 141 313 IPR005202 -
Gso9g1843 317 Pfam GRAS domain family 11 140 IPR005202 -
Gso9g1843 317 ProSiteProfiles GRAS family profile. 2 317 IPR005202 -
Gso9g1843 317 PANTHER SCARECROW-LIKE PROTEIN 3 140 314 - -
Gso9g1843 317 PANTHER SCARECROW-LIKE PROTEIN 3 7 140 - -
Gso9g1843 317 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 7 140 IPR005202 -
Gso9g1843 317 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 140 314 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1843 Gso-Chr9 42837272 42838380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1843 5 313 GRAS Transcription Factor Family AT1G50420 36.745 1.23e-66 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Gso9g1843 GRAS 4.1e-35 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1843 - - gsj:114368516 616.305