Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1841 ATGGCTCCATCTTCTGTCACTGTCACATCCCGTTTTCATGAATCCGTCACCCGCAATGCACTTCGCTCCTATCTCTCTGAGTTTATCTCCACTTTCTTCTATGTCTTTCTTGTCATTGGCGCTGGAATGTCCTCACGGAAGTTGATGCCTGATGCTTCACTGAACCCAACAAGTCTGGTTGTGGTTGGCATTGGAAGTGCATTTGCTTTGTCTTCTGTTCTGTACATCGCATGGGACATCTCCGGTGGACACGTCAATCCGGCTGTGACCTTTGCAATGGCAGTTGGAGGCCACATTAGTGTACCAACCGCTCTCTTTTACTGGGTTGCTCAACTCATAGCCTCTGTTATGGCTTGCCTTGTTTTAAGGGTCATTGTTGTTGGAATGCATGTTCCAACATACACCATTGCAGAAGAGATGACAGGGTTTGGAGCATCGGTGTTAGAGGGTACTCTGACATTTGTTTTGGTGTACACAGTGTATGCAGCCAGGGACCCTAGGCGTGGTCCAATGAGTTCCACTGGCATACTTGTAGTTGGCTTAATTGCTGGTGCAAGTGTCTTGGCCTCAGGTCCATTCTCTGGCGGCTCGATGAACCCTGCCTGTGCTTTTGGCTCGGCTGCCATTGCAGGCAGTTTCAGGAACCAAGCTGTGTATTGGGTTGGACCCTTGATTGGTGCTACCATTGCTGGCCTTCTTTATGACAATGTGTTGTTCCGTTCTCAACTCACAGATTCAATTCAAGGAATTGGGGTCTAA 759 0.4848 MAPSSVTVTSRFHESVTRNALRSYLSEFISTFFYVFLVIGAGMSSRKLMPDASLNPTSLVVVGIGSAFALSSVLYIAWDISGGHVNPAVTFAMAVGGHISVPTALFYWVAQLIASVMACLVLRVIVVGMHVPTYTIAEEMTGFGASVLEGTLTFVLVYTVYAARDPRRGPMSSTGILVVGLIAGASVLASGPFSGGSMNPACAFGSAAIAGSFRNQAVYWVGPLIGATIAGLLYDNVLFRSQLTDSIQGIGV* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1841 252 SUPERFAMILY Aquaporin-like 12 240 IPR023271 -
Gso9g1841 252 PANTHER AQUAPORIN TIP5-1-RELATED 7 247 - -
Gso9g1841 252 ProSitePatterns MIP family signature. 84 92 IPR022357 -
Gso9g1841 252 Pfam Major intrinsic protein 17 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso9g1841 252 PRINTS Major intrinsic protein family signature 22 41 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso9g1841 252 PRINTS Major intrinsic protein family signature 66 90 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso9g1841 252 PRINTS Major intrinsic protein family signature 103 122 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso9g1841 252 PRINTS Major intrinsic protein family signature 148 166 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso9g1841 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso9g1841 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Gso9g1841 252 Gene3D Glycerol uptake facilitator protein. 5 248 IPR023271 -
Gso9g1841 252 PANTHER AQUAPORIN-8 7 247 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1841 Gso-Chr9 42828614 42830043 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1841 1 238 Major Intrinsic Protein MIP AT3G47440 63.866 9.63e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1841 K09873 - gmx:100801448 490.73