Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1824 ATGGCCGCAGCAGCAGCAGCCACTCTCTCCTCTTCCTTCTCCAAACCCTCCTCTCTTCCTTTTCACACCCACTCTTACTCTTTCCCCACAACCCTACCAACAGTCCCCACTCCCCCTCGCGCCGCCGTCGTCAAAACCCCTCTCATCGTTTACTCCAAAAACCCCATTTCCGACATCGTCTCCTCCACCGAGTCACGCTCCGGAGGCGCCTGGGACGACGAGAAGCCGCGCGAGGAGTGCGGCGTGGTGGGCATATACGGCGACCCTGAGGCCTCGCGCCTTTGCTACCTCGCCCTCCACGCGCTTCAGCACCGCGGCCAGGAAGGCGCCGGAATCGTTACGGTTCACAACAACGTCCTCCAATCCATCACCGGCGTTGGTCTCGTTTCCGACGTGTTCAACCAGTCGAAGCTGGACCAGCTCCCCGGCAGCCTCGCCATCGGCCACGTCCGCTACTCCACCGCCGGCCAATCCATGCTCAAAAACGTGCAACCCTTCGTTGCCGGCTACCGCTTCGGCTCCGTCGGCGTGGCCCACAACGGCAACCTCGTCAACTACCGCACCCTCCGAACCAACCTCGAGGACAGCGGGTCCATCTTCAACACTACCTCCGACACCGAGGTTGTTCTCCACCTCATCGCCACTTCCAAACACAGACCCTTCATTTTGAGAATCGTTGACGCCTGTGAAAAGCTCGAAGGGGCTTATTCAATTGTCTTCGTCACCGAGGACAAGCTTGTCGCCGTTCGCGACCCCTTCGGATTCAGACCTTTGGTTATGGGAAGGAGAAGTAACGGGTCTGTGGTTTTCGCTTCTGAAACCTGCGCTCTTGACCTTATTGAAGCGACTTATGAGAGAGAGGTTTACCCTGGTGAGGTTCTTGTTGTGGATAAAAACGGTATTCAGAGTCTATGCCTCATGTCTCATCCTCAACCCAAACAATGCATTTTTGAACATATTTACTTTGCACTTCCCAATTCGGTTGTTTTTGGGAGGTCTGTGTATGAGTCTCGGAGACAATTTGGGGAGATTTTGGCTACTGAGAGTCCTGTGGACTGTGATGTTGTGATTGCTGTGCCTGATTCTGGTGTTGTGGCTGCGCTTGGTTATGCCGCCAAAGCTGGGGTTCCGTTTCAGCAGGGTTTGATTAGGTCACACTATGTTGGGAGGACTTTCATTGAGCCCTCTCAGAAAATTAGGGACTTTGGTGTGAAGCTGAAGCTATCGCCCGTTCGTGCCGTGCTTGAAGGTAAACGTGTTGTGGTTGTGGATGATTCCATTGTGAGAGGAACCACGTCGTCCAAGATTGTTAGGCTGCTGAAGGAGGCCGGTGCTAAGGAGGTTCACATGAGGATTGCGAGTCCTCCCATTATTGGTTCTTGTTACTATGGTGTGGATACTCCTAGCTCCGAGGAGTTGATTTCCAATAGGATGAGTGTGGAGGAGATAAGAGACTTTATCGGGTCGGATTCACTGGCCTTTTTGCCTTTTGATAGCTTGAAGAGGTTGTTGGGGGGTGAAAGTCCGAATTTTTGTTATGCTTGTTTCTCTGGGAATTACCCTGTGGAGCCCAGAGAGCTTAAGGTGAAGAGGGTTGGGGACTTTGTTGATGATGGCTTGAATGGGAGCTTGGAGTCTATTGATGGTGGTTGGGTTCAGGCAAACCAAAATCAAATCAAGCTTGGTACTGGTACTAGTACTAGTACTAGTATTTCACAATAA 1722 0.525 MAAAAAATLSSSFSKPSSLPFHTHSYSFPTTLPTVPTPPRAAVVKTPLIVYSKNPISDIVSSTESRSGGAWDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHNNVLQSITGVGLVSDVFNQSKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRTNLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVLVVDKNGIQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLKRLLGGESPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLESIDGGWVQANQNQIKLGTGTSTSTSISQ* 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1824 573 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 72 552 - -
Gso9g1824 573 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 80 521 IPR029055 -
Gso9g1824 573 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 80 303 IPR029055 -
Gso9g1824 573 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 80 299 IPR017932 -
Gso9g1824 573 SUPERFAMILY PRTase-like 315 526 IPR029057 -
Gso9g1824 573 Pfam Glutamine amidotransferase domain 158 277 IPR017932 -
Gso9g1824 573 TIGRFAM purF: amidophosphoribosyltransferase 80 521 IPR005854 GO:0004044|GO:0009113
Gso9g1824 573 Hamap Amidophosphoribosyltransferase [purF]. 79 520 IPR005854 GO:0004044|GO:0009113
Gso9g1824 573 Gene3D - 339 503 IPR029057 -
Gso9g1824 573 Pfam Phosphoribosyl transferase domain 354 449 IPR000836 -
Gso9g1824 573 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 72 552 - -
Gso9g1824 573 CDD PRTases_typeI 342 453 IPR000836 -
Gso9g1824 573 CDD GPATase_N 80 330 IPR035584 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1824 Gso-Chr9 42705214 42707564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1824 72 553 PRT Gene Family AT2G16570 85.744 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1824 K00764 - gmx:100791919 1082.78