Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1820 ATGTCGTCGGCGTCGACGGGAAGCAGCAGCAGCAGCAAAATCCGGCGCATTGTGCGCGTGCGGCAAATGCTTCTCCGGTGGCGGAGGAAGGTGGCGGTGGACGTTCCGGCGGGACACGTGGCAGTGTGCGTGGGGCCCAGCAGGAGGAGGTTCATCGTGCGCGCGACGCACCTGAACCACCCGATTTTCAAGATGCTTCTTGTGAAGGCCGAAGAGGAATACGGTTTCTGCAACCACGGTCCTCTCGCTATTCCCTGCGACGAGTCTCTCTTCGAACACCTTCTTCGGGTGGTGGCCCGACCCGTACCCCTACCCGGTTTCTCCTCGCTCGAGGATTTTCAGACACGCTGCCACGTGGACTTTGTAGGAGGAGAATCGTGGCCGTTGCTTCGTGACGAGCCAATTTGCTGA 411 0.6034 MSSASTGSSSSSKIRRIVRVRQMLLRWRRKVAVDVPAGHVAVCVGPSRRRFIVRATHLNHPIFKMLLVKAEEEYGFCNHGPLAIPCDESLFEHLLRVVARPVPLPGFSSLEDFQTRCHVDFVGGESWPLLRDEPIC* 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1820 136 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 9 130 IPR003676 GO:0009733
Gso9g1820 136 PANTHER SMALL AUXIN-UP RNA-RELATED 9 130 - -
Gso9g1820 136 Pfam Auxin responsive protein 19 97 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1820 Gso-Chr9 42687180 42687892 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1820 11 130 Calmodulin-binding Proteins AT4G34750 50.000 9.52e-39 126