Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1816 ATGGGTTTCCGTTTGCCTGGTCTTCAAAGGCGCAGTGATGTCCCAAAGGGCTATCTTGCAGTCTATGTGGGAGAAAACGAAAAGAAGCGGTTTGTGATTTCTATATCATATTTGAACCAACCTTCAATCCAAGACCTGCTTAGTCAAGCTGAACAAGAATTTGGATTTGCTCATCCAATGGGTGGCCTCACAATCCCATGTGGAGAAGATGTCTTCCTAGATATCACTTCTCGCTTGCAAAGGTCGTAG 249 0.4458 MGFRLPGLQRRSDVPKGYLAVYVGENEKKRFVISISYLNQPSIQDLLSQAEQEFGFAHPMGGLTIPCGEDVFLDITSRLQRS* 83
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1816 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 80 IPR003676 GO:0009733
Gso9g1816 82 Pfam Auxin responsive protein 10 78 IPR003676 GO:0009733
Gso9g1816 82 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 8 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1816 Gso-Chr9 42659175 42659834 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1816 12 81 Calmodulin-binding Proteins AT4G34750 48.571 1.25e-17 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1816 K14488 - gmx:112997797 167.548