Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1815 ATGGGTTTTCGTCTACCCGCAAGTATCAGAAGGGCATCATTTGCTGCCAACCAAGCATCTTCAAAAACTTTGGAGGTGCCAAAGGGCTATCTTGCAGTCTATGTTGGAGAGAGAATGAAGCGGTTTGTGATCCCCATATCATACTTGACCCAACCTTCATTCCAAGAATTGTTGAATCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGTCTTACAATTCCTTGCAGCGAAGATGTCTTCCAAAACATAACTTCACGCTTGGTTGGGCTGTAA 282 0.4433 MGFRLPASIRRASFAANQASSKTLEVPKGYLAVYVGERMKRFVIPISYLTQPSFQELLNQAEEEFGYDHPMGGLTIPCSEDVFQNITSRLVGL* 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1815 93 PANTHER AUXIN-INDUCED PROTEIN 6B 6 91 - -
Gso9g1815 93 Pfam Auxin responsive protein 11 89 IPR003676 GO:0009733
Gso9g1815 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 6 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1815 Gso-Chr9 42655205 42655952 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1815 25 84 Calmodulin-binding Proteins AT3G43120 55.000 2.49e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1815 K14488 - gmx:100787155 187.578