Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1813 ATGGGTTTTCGTTTACCTGGTATCAGAAAGGCATCCCTTGCTGCAATCCAAGCATCTTCAAAAGCCTTGAATGTGCCAAAGGGCTACCTTGCAATCTATGTTGGAGAGAAAATGAAGCAGTTCGTGATCCCCTTATCATACTTGAACCAGCCTTCATTTCAAGATTTGTTGAGTAAAGCTGAGGAAGAATTCGGGTATGATCATCCAATGGGTGGTCTCACAATTCCTTGCAGAGAAGATGTGTTCTTAGATACCTCTTCTCGCTTGAATAGGTGTTAA 279 0.4229 MGFRLPGIRKASLAAIQASSKALNVPKGYLAIYVGEKMKQFVIPLSYLNQPSFQDLLSKAEEEFGYDHPMGGLTIPCREDVFLDTSSRLNRC* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1813 92 Pfam Auxin responsive protein 17 84 IPR003676 GO:0009733
Gso9g1813 92 PANTHER AUXIN-INDUCED PROTEIN X10A 1 91 - -
Gso9g1813 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1813 Gso-Chr9 42644616 42645003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1813 24 82 Calmodulin-binding Proteins AT3G43120 54.237 1.24e-18 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1813 K14488 - gmx:100795597 187.578