Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1812 ATGGGTTTCCGCATAGCAGGTATTATTAGACGGGCATCATTTTCTACAACCCAAGCAGCCTCCAAGAGGGTTGAAGTTCCCAAAGGCTATCTTGCAGTTTATGTTGGTGATAAGATGAGGCGGTTCATGATTCCAGTATCATACTTGAACCAACCTTCATTTCAAGAATTATTAAATCAAGCTGAAGAAGAATTTGGATATGATCATCCAACTGGTGGTCTCACAATTCCATGTCAGGAGGATGAGTTCCTAAATCCAGAGAAAACAATGGGTTTCCGCATACCTGCTATTATCAGACAAGCATCGCTATCTACAACCCAAACAGCCTCCAAGAGGGTTGAAGTACAAAAAGGCTATTTTGCAGTCTATGTTGGAGATAAGATGAGGCGGTTCATGATTCCAGTATCATACTTGAACCAACCTTCATTTCAAGAATTATTAAGTCAAGCAGAAGAAGAATTTGGATTTGATCAGCCAACGGGTGGTCTCACAATTCCATGCAAGGAGGATGAGTTCCTAAACATCATCGCTAACTTGAATGAGCTGTAA 549 0.4098 MGFRIAGIIRRASFSTTQAASKRVEVPKGYLAVYVGDKMRRFMIPVSYLNQPSFQELLNQAEEEFGYDHPTGGLTIPCQEDEFLNPEKTMGFRIPAIIRQASLSTTQTASKRVEVQKGYFAVYVGDKMRRFMIPVSYLNQPSFQELLSQAEEEFGFDQPTGGLTIPCKEDEFLNIIANLNEL* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1812 182 Pfam Auxin responsive protein 12 83 IPR003676 GO:0009733
Gso9g1812 182 Pfam Auxin responsive protein 104 177 IPR003676 GO:0009733
Gso9g1812 182 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 90 181 IPR003676 GO:0009733
Gso9g1812 182 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 85 IPR003676 GO:0009733
Gso9g1812 182 PANTHER AUXIN-INDUCED PROTEIN 10A5 90 181 - -
Gso9g1812 182 PANTHER AUXIN-INDUCED PROTEIN 10A5 1 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1812 Gso-Chr9 42635149 42638713 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1812 15 83 Calmodulin-binding Proteins AT3G43120 52.174 1.18e-19 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1812 - K14488 aip:110269930 237.654