Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1811 ATGGGTTTCCGTTTTCCTGCCATTCGACGGGCATCATTCAACGCTAACCAAGCAGCTTCAAAATCAGTACAAGTTCCGAAGGGCTATGTTGCAGTCTATGTTGGAGAAAATATGAGGAGGTTCGTGATCCCCATATCATACTTAAACCAACCTTCATTCCAAGACTTATTGAGTCAAGCTGAGGAAGAGTTTGGATATGATCATCCCATGGGTGGCCTCACAATTCCTTGCAGTGAAGATGTCTTCCAACAGACAACTTCTCGCTTAAATGAACAATAA 279 0.4301 MGFRFPAIRRASFNANQAASKSVQVPKGYVAVYVGENMRRFVIPISYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQQTTSRLNEQ* 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1811 92 Pfam Auxin responsive protein 10 88 IPR003676 GO:0009733
Gso9g1811 92 PANTHER AUXIN-INDUCED PROTEIN 6B 1 90 - -
Gso9g1811 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1811 Gso-Chr9 42628931 42629408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1811 24 83 Calmodulin-binding Proteins AT3G43120 55.000 2.28e-19 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1811 K14488 - gmx:106794448 188.348