Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1810 ATGGCTTTTCGTTTACCTGGTATCAGAAAGGCTTCCCTTGCTGCAATCCAGGGAAATTCAAAAGCTGTGGATGTTCCAAAGGGCTACCTTGCAGTCTATGTTGGAGATAAAATGAAGCAGTTCATGATCCCTGTAACATACTTGAACCAACCTTCATTTCAAGATTTGTTGAGTCAAGCTGAGGAAGAATTCGGAATATGGGAATCACAAACCGCTTCTGTTTCTCTCCAATATACACTGCGAGATAGCCCTTTGGGACTTCCAAAGATTTTGAAGCTGCTTGGCAAGCTGCAAATGATGCTCATCGAATATCAGGATGCAAATGGCTTGGGTTGTTTGAGCCAACCTTTATTTCAAGGTTTGTTGAGTCAAGCTGAAGAAGAATTTAGGTATGACCATCCAATGGGTGGTCTCACAATTCCTTGTGGAGAAGCTGTGTTCATTGATACCATTTCTCGCTTGAATAGTTGCTAA 474 0.4198 MAFRLPGIRKASLAAIQGNSKAVDVPKGYLAVYVGDKMKQFMIPVTYLNQPSFQDLLSQAEEEFGIWESQTASVSLQYTLRDSPLGLPKILKLLGKLQMMLIEYQDANGLGCLSQPLFQGLLSQAEEEFRYDHPMGGLTIPCGEAVFIDTISRLNSC* 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1810 157 PANTHER AUXIN-INDUCED PROTEIN 10A5 8 67 - -
Gso9g1810 157 PANTHER AUXIN-INDUCED PROTEIN 10A5 113 156 - -
Gso9g1810 157 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 8 67 IPR003676 GO:0009733
Gso9g1810 157 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 113 156 IPR003676 GO:0009733
Gso9g1810 157 Pfam Auxin responsive protein 17 67 IPR003676 GO:0009733
Gso9g1810 157 Pfam Auxin responsive protein 112 153 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1810 Gso-Chr9 42624701 42627413 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1810 24 69 Calmodulin-binding Proteins AT3G43120 54.348 2.38e-11 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1810 - K14488 gsj:114368513 308.531