Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1797 ATGAAGAATTCTTCTCTCATGTTACTTGCATTTTGGTCTGTATATGTCCACCTGTTTTGTCTCTTCATGTTAAACTCACTATGCTTTATCCCAAACATGACTACGTTTGCCTCAAGAAATGAGATTGACCATTTGGCACTACTCAAATTCAAGGAATCCATATCCACTGACCCATATGGAATCTTCCTCTCTTGGAATACTTCTAATCACTTTTGTAATTGGCCTGGAATCACATGCAATCCCAAGCTTCAAAGAGTTACACAGTTAAACTTGACAGGATACAAGTTGGAGGGATCCATATCTCCCCACGTAGGAAATCTCTCTTATATGATAAAGTTAAACCTAGCAACCAACAGCTTCCACGGGAAAATCCCACAAGAACTGGGACGGTTGTCACATCTGCAGCAACTCTCTGTCGCAAATAACTTATTGGCAGGGGAAATTCCTACAAACTTGACAGGTTGTACTGATCTCAAAATCTTATACTTACATAGGAACAATCTGATTGGCAAAATACCAATCCAAATTGGTTCACTTCAGAAGCTTGAACAATTGAGCACTTCTCGTAACAAGTTAACTGGAGGAATCCCTTCATTCACAGGTAATCTTTCGTCCCTAACTCTTCTCGATATCGGTAATAACAACTTAGAGGGAGATATTCCACAAGAAATATGTCTTCTCAAAAGCTTGACATTTTTAGCATTGGGTCAAAACAACCTGACTGGAACATTACCTCCTTGTCTATATAATATGTCATCTCTTACTATGATCTCAGCCACAGAAAATCAATTAAATGGTTCTCTTCCACCCAACATGTTCCACACCCTCTCCAATCTCCAAGAATTTTATATTGCTGTCAACAAAATCTCTGGTCCAATCCCACCTTCCATCACAAATGCATCAATATTCTTTTTAGCACTTGAGGCCAGTAGGAACAATCTTACGGGACAAATTCCAAGCCTGGGGAAGCTACAATATCTTGATATCCTATCTCTGTCATGGAATAATCTAGGTGACAATTCAACTAATGATTTGGATTTTCTAAAATCATTGACAAACTGCAGTAATTTGCATATGATATCTATCTCCTACAATAATTTTGGAGGTCATTTGCCCAATTCTTTGGGTAATTTATCCTCCCAACTTAGTCTACTATATCTCGGAGGTAATCAGATATCAGGAGAAATCCCTGCAGCAATAGGAAATCTAATTGGCTTGACTCTTTTGACGATGGAAAATAACAGCATTAGTGGGAATATCCCAACAAGTTTTGGGAAGTTTCAGAAAATGCAAAAGATAAATTTGGCTGGAAACAAGTTGTCAGGAGAGATTAGAGCCTACATAGGCAACCTTAGTCAATTGTTTCACTTGGAATTAAATGAAAATGTGTTAGAAGGGAATATTCCTCCAAGTTTAGGAAACTGCCAGAAGTTACAATACTTGGACCTTTCTCATAACAACCTTACAGGAACCATACCCTCAGAGGTTTTTATGCTTTCCTCTCTAACAAAATTGTTGAATTTGTCACAAAACTCATTAAGTGGTAGTATACCAGACAAAGTGGGCAACTTAAAAAATCTTGATTTACTAGATATGTCTGAGAATCGTCTATCTAGTGAAATTCCTGGAACCATCGGAGAATGCATAATGTTGGAATACCTTTATCTGCAAGGGAATTCTCTGCAAGGAATCATACCATCCTCTTTGGCATCACTCAAAGGGCTTCAACGTTTAGACCTCTCACGAAACAACTTGTCTGGATCAATTCCTAATGTTTTGCAGAAAATTACAATCTTAAAATATTTCAACGTATCTTTTAACAAGTTGGATGGTGAGGTGCCTACTGAAGGTTTCTTTCAAAATGCAAGTGCGTTAGTGTTGAATGGAAATAGTAAGCTTTGTGGAGGAATTTCAAAACTACATCTACCGCCATGCCCTCTCAAAGGTAAGAAACTTGCAAGACACCAAAAGTTCAGGTTGATAGCAGCGATAGTCAGTGTGGTTGTTTTTCTTCTCATGTTATCCTTTATTCTAACTATCTACTGGATGAGAAAAAGAAGTAACAAACCGTCTTTGGAATCACCTACAATTGACCACCAGCTGGCTCAAGTTTCATACCAAAGCCTACATAATGGCACTGATGGCTTCTCATCTACAAACTTGATAGGGTCTGGAAGTTTCAGCTCTGTCTACAAAGGAACTCTTGAGTTTAAAGACAAAGTTGTTGCCATAAAGGTCCTAAACCTTGAAAAAAAAGGAGCCCACAAGAGTTTCATTACTGAATGCAATGCACTTAAAAATATTAAACATCGAAATCTAGTTCAAATTTTAACATGTTGTTCCAGCTCAGATTACAAAGGTCAAGAATTTAAAGCTCTAATTTTTGAGTACATGAGAAATGGAAGCTTAGAGCAATGGCTGCATCCTAGCACACTAAATGCAGAGCAACCGAGAACATTGAATCTTGATCAAAGATTAAATATCATGATTGATATTGCTTCTGCAATACATTATCTTCATCATGAATGTGAGCAATCAATCGTTCATTGTGATTTAAAGCCAAGCAATGTCCTTCTTGATGACGACATGGTTGCTCATGTGAGTGATTTTGGCATAGCAAGACTTCTCTCAACTATCAATGAGACCACTTCTAAGCAAACAAGTACAATTGGAATAAAAGGGACTCTTGGCTATGCTCCTCCAGAGTATGGAATGACTTCTGAGGTGTCAACTTATGGGGACGTGTACAGCTTTGGAATTCTTATGTTGGAAATGCTTACTGGAAGAAGACCAACAGATGAAATCTTTGAAGATGGTCAAAATCTTCGTAACTTTGTTGCAATTTCATTTCCTGATAATATTTCTCAGATTTTGGATCCACAACTTATTCCAAGTGATGAAGCAACGACATTGAAAGAAAACCATCATAATCTTAATCCAAGTGTTGAGATGTGTTTAGTTTCACTTTTTAGAATTGGACTTGCTTGTTCTATGGAATCACAGAAAGAACGAAAGACAATGAATGATGTCATCATGGAACTTAATCGAATCAGGGAGGTCCTTTCTACCTGTTGGTGA 3078 0.3762 MKNSSLMLLAFWSVYVHLFCLFMLNSLCFIPNMTTFASRNEIDHLALLKFKESISTDPYGIFLSWNTSNHFCNWPGITCNPKLQRVTQLNLTGYKLEGSISPHVGNLSYMIKLNLATNSFHGKIPQELGRLSHLQQLSVANNLLAGEIPTNLTGCTDLKILYLHRNNLIGKIPIQIGSLQKLEQLSTSRNKLTGGIPSFTGNLSSLTLLDIGNNNLEGDIPQEICLLKSLTFLALGQNNLTGTLPPCLYNMSSLTMISATENQLNGSLPPNMFHTLSNLQEFYIAVNKISGPIPPSITNASIFFLALEASRNNLTGQIPSLGKLQYLDILSLSWNNLGDNSTNDLDFLKSLTNCSNLHMISISYNNFGGHLPNSLGNLSSQLSLLYLGGNQISGEIPAAIGNLIGLTLLTMENNSISGNIPTSFGKFQKMQKINLAGNKLSGEIRAYIGNLSQLFHLELNENVLEGNIPPSLGNCQKLQYLDLSHNNLTGTIPSEVFMLSSLTKLLNLSQNSLSGSIPDKVGNLKNLDLLDMSENRLSSEIPGTIGECIMLEYLYLQGNSLQGIIPSSLASLKGLQRLDLSRNNLSGSIPNVLQKITILKYFNVSFNKLDGEVPTEGFFQNASALVLNGNSKLCGGISKLHLPPCPLKGKKLARHQKFRLIAAIVSVVVFLLMLSFILTIYWMRKRSNKPSLESPTIDHQLAQVSYQSLHNGTDGFSSTNLIGSGSFSSVYKGTLEFKDKVVAIKVLNLEKKGAHKSFITECNALKNIKHRNLVQILTCCSSSDYKGQEFKALIFEYMRNGSLEQWLHPSTLNAEQPRTLNLDQRLNIMIDIASAIHYLHHECEQSIVHCDLKPSNVLLDDDMVAHVSDFGIARLLSTINETTSKQTSTIGIKGTLGYAPPEYGMTSEVSTYGDVYSFGILMLEMLTGRRPTDEIFEDGQNLRNFVAISFPDNISQILDPQLIPSDEATTLKENHHNLNPSVEMCLVSLFRIGLACSMESQKERKTMNDVIMELNRIREVLSTCW* 1026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1797 1025 Gene3D Ribonuclease Inhibitor 43 157 IPR032675 -
Gso9g1797 1025 CDD STKc_IRAK 722 1017 - -
Gso9g1797 1025 ProSitePatterns Serine/Threonine protein kinases active-site signature. 847 859 IPR008271 GO:0004672|GO:0006468
Gso9g1797 1025 ProSiteProfiles Protein kinase domain profile. 716 1025 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1797 1025 SMART LRR_typ_2 131 155 IPR003591 -
Gso9g1797 1025 SMART LRR_typ_2 227 251 IPR003591 -
Gso9g1797 1025 SMART LRR_typ_2 476 499 IPR003591 -
Gso9g1797 1025 SMART LRR_typ_2 179 203 IPR003591 -
Gso9g1797 1025 SMART LRR_typ_2 572 595 IPR003591 -
Gso9g1797 1025 SMART LRR_typ_2 524 548 IPR003591 -
Gso9g1797 1025 SMART LRR_typ_2 451 475 IPR003591 -
Gso9g1797 1025 Pfam Leucine rich repeat 551 609 IPR001611 GO:0005515
Gso9g1797 1025 Pfam Leucine rich repeat N-terminal domain 43 80 IPR013210 -
Gso9g1797 1025 SUPERFAMILY L domain-like 42 337 - -
Gso9g1797 1025 Gene3D Ribonuclease Inhibitor 161 271 IPR032675 -
Gso9g1797 1025 Pfam Protein kinase domain 718 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1797 1025 PANTHER LRR RECEPTOR-LIKE KINASE 29 1016 - -
Gso9g1797 1025 ProSitePatterns Protein kinases ATP-binding region signature. 722 745 IPR017441 GO:0005524
Gso9g1797 1025 Gene3D Transferase(Phosphotransferase) domain 1 798 1023 - -
Gso9g1797 1025 Pfam Leucine Rich Repeat 477 494 IPR001611 GO:0005515
Gso9g1797 1025 PANTHER OS04G0122200 PROTEIN 29 1016 - -
Gso9g1797 1025 SUPERFAMILY Protein kinase-like (PK-like) 689 1014 IPR011009 -
Gso9g1797 1025 ProSiteProfiles Leucine-rich repeat profile. 477 499 IPR001611 GO:0005515
Gso9g1797 1025 Gene3D Phosphorylase Kinase; domain 1 696 797 - -
Gso9g1797 1025 Gene3D Ribonuclease Inhibitor 272 342 IPR032675 -
Gso9g1797 1025 PRINTS Leucine-rich repeat signature 478 491 - -
Gso9g1797 1025 PRINTS Leucine-rich repeat signature 524 537 - -
Gso9g1797 1025 SMART serkin_6 716 990 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1797 1025 SUPERFAMILY L domain-like 307 639 - -
Gso9g1797 1025 Gene3D Ribonuclease Inhibitor 343 652 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1797 Gso-Chr9 42422319 42425736 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1797 33 1019 Receptor kinase-like Gene Family AT3G47570 45.110 0.0 817
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso9g1797 Pkinase 1.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1797 - - gmx:102664380 1996.86