Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1795 ATGGACACTTTTTTTCTCCTGGTACCTCCATTTGGGTCTGTAGCATGCCTTCCCATGCTTGTTCTCTTTATTATTAACTCCTTCTTGTGTGTCCCAAACACAACTGCTTCTATATTAGGAAACCAGAGCGACCATTTGGTGTTGCTCAAATTCATGGGATCAATATCAAATGACCCTCATCAAATCTTTGCCTCATGGAATAGTTCCACCCATTTTTGTAAGTGGCGTGGAGTTACATGCAATCCCATGTATCAAAGAGTTACACAGTTGAATCTTGAAGGAAACAACTTGCAAGGATTCATATCACCTCATTTAGGAAATCTCTCTTTCCTAACAAGTCTTAACCTTGGAAACAACAGCTTCAGTGGTAAAATTCCACAAGAACTGGGTCGGTTGTTACAATTACAAAACTTATCTCTCACCAATAACTCCTTGGAAGGAGAAATTCCTACAAACTTGACAAGTTGCTCTAATCTCAAAGTGTTACACTTATCTGGTAACAATTTGATTGGCAAAATACCAATTGAAATTGGCTCTCTTCGAAAGCTCCAAGCAATGAGCCTTGGAGTAAACAATTTAACCGGAGCAATCCCATCTTCCATAGGGAATCTTTCATCCCTCATTTCTCTCTCAATCGGTGTTAATTACTTGGAGGGCAACCTTCCACAAGAAATTTGCCACCTCAAAAACCTGGCATTGATATCAGTGCATGTCAACAAGCTGATAGGTACATTTCCTTCTTGTCTTTTCAATATGTCATGTCTTACCACAATCTCAGCAGCAGACAATCAATTCAATGGCTCTCTCCCGCCAAACATGTTCCACACTCTCCCTAATCTCCGAGAATTTCTAGTTGGCGGGAATCATTTTTCAGCTCCACTTCCAACTTCCATTACAAATGCTTCAATCCTACAAACACTTGATGTTGGTAAAAACCAGTTGGTGGGCCAAGTGCCAAGTCTAGGAAAGCTACAACACCTTTGGTTCCTAAGCTTGTATTACAACAACTTAGGTGACAATTCAACAAAGGACTTGGAGTTTTTAAAATCCTTGGCCAATTGTAGCAAGTTGCAAGTGGTTTCGATTTCCTATAATAATTTTGGAGGTAGTTTGCCAAATTCTGTGGGAAATTTATCCACCCAACTCAGTCAACTATATCTTGGGGGTAATCAAATATCAGGAAAAATTCCTGCAGAATTAGGAAATCTAGTTAGCTTAACTATCTTAACCATGGAAATTAACCACTTTGAAGGAAGTATTCCAGCCAATTTTGGGAAGTTTCAGAAGTTACAAAGGTTGGAATTGAGTAGAAACAAACTGTCAGGAGATATGCCAAATTTTATAGGCAACCTTACTCAGTTGTATTTTTTGGGCATAGCAGAAAATGTGTTAGAAGGAAAGATTCCTCCAAGTATAGGAAACTGTCAAAAGTTGCAATACCTTAACCTTTATAACAACAACCTTAGAGGAAGCATACCTTCAGAGGTTTTTAGCCTTTTCTCGTTAACAAACTTGTTGGACTTGTCAAAAAATTCAATGAGTGGAAGTCTACCTGATGAAGTGGGCCGGTTAAAAAATATTGGGAGGATGGCTCTATCTGAAAATAATTTGTCTGGTGACATTCCTGAAACCATTGGAGACTGCATAAGCTTGGAGTACCTTTTACTGCAAGGGAATTCGTTTGATGGAGTCATACCATCCTCATTGGCTTCACTCAAAGGTCTTCGAGTATTAGACATATCACGAAATCGTCTGGTTGGATCAATTCCTAAGGATCTGCAGAAAATTTCTTTCTTGGAATACTTCAATGCATCCTTTAACATGTTGGAGGGTGAAGTACCAATGGAAGGTGTCTTTGGGAATGCAAGTGAGTTAGCAGTGATTGGGAACAACAAGCTATGTGGGGGTGTTTCAGAGCTGCATCTACCACCATGCCTTATCAAAGGTAAGAAATCTGCAATACACCTGAATTTCATGTCCATAACAATGATGATAGTTAGTGTGGTTGCTTTTCTTCTCATACTTCCAGTTATCTACTGGATGAGGAAAAGAAACGAGAAAAAAACATCATTTGATTTGCCAATAATTGACCAAATGAGTAAGATTTCCTACCAGAACCTACACCATGGAACTGATGGGTTCTCAGTTAAAAACTTGGTAGGATCTGGGAACTTTGGCTTTGTATACAAAGGGACTATTGAGTTAGAAGGAAATGATGTTGTTGCCATAAAGGTGCTAAACCTTCAAAAGAAGGGAGCTCAAAAGAGTTTCATTGCGGAATGTAATGCATTGAAAAATGTTAGGCATCGAAACTTGGTTAAGATTTTAACATGTTGTTCTAGCATAGATCACAGAGGCCAAGAATTCAAAGCTCTAGTTTTTGAGTATATGACAAATGGAAGCTTAGAAAGATGGTTGCATCCAGAAACAGAAATTGCAAATCATACTTTCTCATTGAGCCTTGACCAAAGGTTGAATATTATCATCGATGTTGCTTCTGCATTTCATTATCTTCACCATGAATGTGAGCAAGCTATCATTCATTGTGATTTGAAGCCAAGCAATGTTCTTCTTGATGATTGCTTGGTAGCTCATGTGAGTGACTTTGGTTTAGCGAGAAGGCTCTCATCTATTGCAGTTTCTCCAAAGCAAACTAGCACTATTGAAATAAAGGGAACAATTGGTTATGCTCCTCCAGAATATGGAATGGGTTCAGAGGTGTCTACGGAAGGCGACTTGTATAGCTTTGGAATTCTGGTTTTGGAAATGTTAACTGGAAGAAGACCAACTGATGAAATGTTTGAAGATGGTCATAATCTCCATAACTATGTCAACATTTCAATTCCACACAACCTTTCCCAGATTGTGGACCCGACTATTCTCCCTAAGGAATTAAAGCAGGCTTCAAATTACCAAAACCTGAACCCTATGCATCTTGAAGTAGAAAAATGTCTACTTTCCCTTTTTAGGATTGCTCTTGCTTGTTCAAAGGAGTCACCAAAAGAAAGAATGAGTATGGTTGATGTCACTAGGGAGCTCAATCTGATCAAAAGTTCCTTTTCATCATGA 3069 0.3877 MDTFFLLVPPFGSVACLPMLVLFIINSFLCVPNTTASILGNQSDHLVLLKFMGSISNDPHQIFASWNSSTHFCKWRGVTCNPMYQRVTQLNLEGNNLQGFISPHLGNLSFLTSLNLGNNSFSGKIPQELGRLLQLQNLSLTNNSLEGEIPTNLTSCSNLKVLHLSGNNLIGKIPIEIGSLRKLQAMSLGVNNLTGAIPSSIGNLSSLISLSIGVNYLEGNLPQEICHLKNLALISVHVNKLIGTFPSCLFNMSCLTTISAADNQFNGSLPPNMFHTLPNLREFLVGGNHFSAPLPTSITNASILQTLDVGKNQLVGQVPSLGKLQHLWFLSLYYNNLGDNSTKDLEFLKSLANCSKLQVVSISYNNFGGSLPNSVGNLSTQLSQLYLGGNQISGKIPAELGNLVSLTILTMEINHFEGSIPANFGKFQKLQRLELSRNKLSGDMPNFIGNLTQLYFLGIAENVLEGKIPPSIGNCQKLQYLNLYNNNLRGSIPSEVFSLFSLTNLLDLSKNSMSGSLPDEVGRLKNIGRMALSENNLSGDIPETIGDCISLEYLLLQGNSFDGVIPSSLASLKGLRVLDISRNRLVGSIPKDLQKISFLEYFNASFNMLEGEVPMEGVFGNASELAVIGNNKLCGGVSELHLPPCLIKGKKSAIHLNFMSITMMIVSVVAFLLILPVIYWMRKRNEKKTSFDLPIIDQMSKISYQNLHHGTDGFSVKNLVGSGNFGFVYKGTIELEGNDVVAIKVLNLQKKGAQKSFIAECNALKNVRHRNLVKILTCCSSIDHRGQEFKALVFEYMTNGSLERWLHPETEIANHTFSLSLDQRLNIIIDVASAFHYLHHECEQAIIHCDLKPSNVLLDDCLVAHVSDFGLARRLSSIAVSPKQTSTIEIKGTIGYAPPEYGMGSEVSTEGDLYSFGILVLEMLTGRRPTDEMFEDGHNLHNYVNISIPHNLSQIVDPTILPKELKQASNYQNLNPMHLEVEKCLLSLFRIALACSKESPKERMSMVDVTRELNLIKSSFSS* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1795 1022 SUPERFAMILY Protein kinase-like (PK-like) 689 1013 IPR011009 -
Gso9g1795 1022 Pfam Leucine Rich Repeat 158 178 IPR001611 GO:0005515
Gso9g1795 1022 ProSiteProfiles Leucine-rich repeat profile. 477 499 IPR001611 GO:0005515
Gso9g1795 1022 Gene3D Ribonuclease Inhibitor 191 256 IPR032675 -
Gso9g1795 1022 ProSiteProfiles Protein kinase domain profile. 714 1015 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1795 1022 Gene3D Transferase(Phosphotransferase) domain 1 797 1021 - -
Gso9g1795 1022 CDD STKc_IRAK 720 1016 - -
Gso9g1795 1022 Pfam Protein kinase domain 715 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1795 1022 Gene3D Ribonuclease Inhibitor 41 190 IPR032675 -
Gso9g1795 1022 Gene3D Phosphorylase Kinase; domain 1 695 796 - -
Gso9g1795 1022 Gene3D Ribonuclease Inhibitor 257 645 IPR032675 -
Gso9g1795 1022 Pfam Leucine rich repeat N-terminal domain 42 81 IPR013210 -
Gso9g1795 1022 Pfam Leucine rich repeat 550 609 IPR001611 GO:0005515
Gso9g1795 1022 PANTHER OS04G0122200 PROTEIN 29 1021 - -
Gso9g1795 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Gso9g1795 1022 SUPERFAMILY L domain-like 380 635 - -
Gso9g1795 1022 ProSitePatterns Protein kinases ATP-binding region signature. 720 744 IPR017441 GO:0005524
Gso9g1795 1022 SUPERFAMILY L domain-like 42 337 - -
Gso9g1795 1022 PANTHER LRR RECEPTOR-LIKE KINASE 29 1021 - -
Gso9g1795 1022 SMART serkin_6 714 1021 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1795 Gso-Chr9 42402467 42406109 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1795 41 1020 Receptor kinase-like Gene Family AT3G47570 44.422 0.0 820
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Gso9g1795 Pkinase 4.1e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1795 - - gmx:100786600 1990.31