Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1791 ATGGAGAATGCGAGAATAAGCCAGTGGTTGATCCTTCTGGTGTGTGCGCTGCTGTTGCTGATATCAGAAGCTTCTTATGTGCCAATCACTATTGTTCAGAACGCGGTAGCAAAAGGAGCTGTTTGTTTGGATGGGAGTCCACCAGCTTATCATTTTGATAGGGGATTTGGATCAGGGATTAACAATTGGTTGGTTGCATTTGAGGGAGGAGGATGGTGCAACAATGTCACTACTTGCCTTGCTCGCAAGACCAATCGTTTAGGTTCATCTAAGCAAATGGCCAAGCTAATTGCCTTTTCAGGAATTTTGAATAACAGGGAAATGTTTAATCCAGATTTCTACAACTGGAACAGAATCAAGGTTAGGTATTGTGATGGTTCATCATTTACTGGTGATGTGGAAGCAGTGAATCCAGTGACTAAGTTGCACTTCAGAGGAGGTAGGATTTTCAATGCTGTCATGGAGGATTTACTAGCAAAAGGAATGAAAAATGCTCGAAATGTAAGAGAGGCTATTATCTCGGGATGTTCAGCTGGAGGATTAACATCAGTACTGCATTGTGATCGATTTCGAGCTCTATTACCTAGGGGAGCTAGAGTGAAATGCCTCTCAGATGCTGGTTACTTTATCAATGGAAAGGATGTCTTGGGAGAACAACACATTGAACAGTACTTCAGTCAAGTTGTTGCCACACATGGCTCTGCTAGGAATTTGCCTCAATCGTGCACTTCAAGACTTAGCCCAAGGCTGTGCTTTTTCCCACAATATTTGGTGTCACGTATCACTACACCAATCTTCTTTGTAAACGCGGCTTACGACTCATGGCAGATTAAGAACATTTTGGCACCGGGTGTTGCTGATCCTGAAGGCCATTGGCATAGCTGCAAGCTTGATATAAACAACTGCTCACCTGATCAACTTGATCTAATGCAAGGCTTCAGGACAGAATTTTTAAGGGCTATAACTGTGCTAGGCAACTCTTCATCTAAAGGAATGTTCATAGACTCTTGCTATGCCCACTGCCAAACTGAAATGCAGGAGACATGGTTGAGAAGTGACTCTCCAGAGCTGAAAAAGACAACAATTGCAAAGGCTGTAGCAGATTGGTTTTATGAAAGAAGGCCTTTCCATCAGATAGATTGCCCTTACCCTTGCAACCCCACTTGTCACAACCGTGTTTTCGATCCACAAGACGACCATCCAGGAAAAAATGTGACCGCGAAAGGAACATCAGATGCATCAGCTACAAAGCCCAATTTTCCCAAACTAACAAACAAGGCACAGTGGATTGAACTTGTGTGCATTAGTCGCGGGATCAGTGGGCTTCTACTAACGTTGGTTCTTCTGAACAAGATGAAATAA 1362 0.4332 MENARISQWLILLVCALLLLISEASYVPITIVQNAVAKGAVCLDGSPPAYHFDRGFGSGINNWLVAFEGGGWCNNVTTCLARKTNRLGSSKQMAKLIAFSGILNNREMFNPDFYNWNRIKVRYCDGSSFTGDVEAVNPVTKLHFRGGRIFNAVMEDLLAKGMKNARNVREAIISGCSAGGLTSVLHCDRFRALLPRGARVKCLSDAGYFINGKDVLGEQHIEQYFSQVVATHGSARNLPQSCTSRLSPRLCFFPQYLVSRITTPIFFVNAAYDSWQIKNILAPGVADPEGHWHSCKLDINNCSPDQLDLMQGFRTEFLRAITVLGNSSSKGMFIDSCYAHCQTEMQETWLRSDSPELKKTTIAKAVADWFYERRPFHQIDCPYPCNPTCHNRVFDPQDDHPGKNVTAKGTSDASATKPNFPKLTNKAQWIELVCISRGISGLLLTLVLLNKMK* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1791 453 MobiDBLite consensus disorder prediction 396 419 - -
Gso9g1791 453 PANTHER NOTUM-RELATED 3 411 IPR004963 GO:0016787
Gso9g1791 453 PANTHER PECTIN ACETYLESTERASE 3 411 - -
Gso9g1791 453 Pfam Pectinacetylesterase 22 374 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1791 Gso-Chr9 42366392 42373718 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1791 5 401 Carbohydrate Esterase AT4G19420 61.343 0.0 570
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1791 K19882 - gmx:100776478 902.508
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1292 1 49360772 49368678 Gso9g1791 9 42366392 42373718 GST
Gso9g1791 9 42366392 42373718 Gso16g0878 16 21736457 21742821 PCT
Gso16g0880 16 21811143 21815574 Gso9g1791 9 42366392 42373718 PCT