Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1787 ATGCGATGTAGAGAGATAGGCATGGCGGGGCAATCGCGGAAGTGGATGATCCTGGTGGCCAGCATATGGATTCAGGCATTCACCGGCACCAACTTCGACTTCTCCGAGTACTCCTCTTCCTTGAAATCCCATCTCAACATCTCTCAGCTGCAACTCAACTACCTCGCCACCGCCAGCGACATGGGCAAGGTCTTCGGTTGGTCCTCTGGCCTCGCTCTCATCCACTTACCGCTCTCCCTCGTCTTGCTCATCGCCTCCTCCATGGGCTTCATCGGCTACGGCCTCCAGTGGCTCGCCATCAAAAATCTCATCACCTTGCCTTATTCTCTCTACTTTCTTCTGTGTCTGTTGAGTGGTTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTCCCGGTTAACAGACCCCTTGCATTATCACTCACTGTGAGCTTCAATGGTGTGAGTGCAGCACTCTACACACTTGCTGCCAATTCAATAGACCCTTCATCTGATGCACTGTATCTGCTCCTGAATGCCCTTGTTCCTCTTCTCACTTCCCTTGTAGCACTAGTCCCAATTCTTCTCCAACCCCCTTTAGACTCTCTCAATAGATCTCCAGAAGCTTCTCGCAGGAACTCTGTGATATTTCTAGTACTCAACTTCCTAGCCATTTTCACTGGTATTTACCTCCTCCTCTTTGGCTCAACAACTTGTGATGAATCCACGTCGAGGCTCTACTTTGGTGGTGCCATTTTGCTCCTCATTTCCCCACTATGTATCCCTGGAACTATATATGCTCGAGATTGGTTTCACCATGCCATCCATTCCAGCTTTCGGATGGAAGGTTCCGGCTTCATTCTTGTTCATGTTGATGATCTTGAGCTTCATAAGGAACTCCTCACATGTCAAAACAGCGCTCTAAGTCTCAGTAATGGGGACAGTCATGGCCTGCTGAGTGAGAATGGATCCATTTATGTAATTAGTCAGAGTGCAAAATCTAGTGATTTGTGTTGTGACAAGATGTTTGGCCAGGATCAGTTGGCAATGCTAGGTGAAGAGCACACTGCTGCAGTGGTTGTCCGGAGGTTGGATTTCTGGCTCTATTATGTTACATACTTCTGTGGAGGCACAATTGGACTTGTTTACAGCAATAATCTGGGGCAGATAGCTCAATCTTTAGGCCTCAGTTCAAGCATATCTACCCTTGTCACACTATACTCGGCATTTTCCTTCTTTGGCCGCTTGCTTTCAGCTGTACCAGACTATATTCGAAATAAGTTCTACTTTGCAAGGACCGGATGGCTAGCCATTGCACTTGTTCCAACCCCAGTTGCGTTCATATTGCTTGCTGTATCAGACAGTGCCGCTGCGCTTAAAACAGGCACTGCATTGATTGGTTTGAGTTCTGGCTTCATATTCGCGGCTGCTGTGGCAGTTACATCGGAGCTATTTGGACCCAACAGTGTGAGTGTCAATCACAACATTCTCATAACAAATATCCCCATTGGGTCGCTTCTGTATGGTTTTCTGGCTGCGTTGATTTATGATGAGAATGCTTACAATGTCCCGGGAGAGTTAATGGCTGACACACTGGTGTGCATGGGAAGAAAGTGCTACTTCTGGACATTTGTCTGGTGGGGAGGAATGTCTGTCCTAGGACTTACTTCTAGTGTGTTGTTGTTCTTGAGAACCAAACACGCGTATGATCGCTTCGAGAGACATCGGATTTCAGCGCAATCAGTTGTGTCTTAG 1752 0.472 MRCREIGMAGQSRKWMILVASIWIQAFTGTNFDFSEYSSSLKSHLNISQLQLNYLATASDMGKVFGWSSGLALIHLPLSLVLLIASSMGFIGYGLQWLAIKNLITLPYSLYFLLCLLSGCSICWFNTVCFVLCIRNFPVNRPLALSLTVSFNGVSAALYTLAANSIDPSSDALYLLLNALVPLLTSLVALVPILLQPPLDSLNRSPEASRRNSVIFLVLNFLAIFTGIYLLLFGSTTCDESTSRLYFGGAILLLISPLCIPGTIYARDWFHHAIHSSFRMEGSGFILVHVDDLELHKELLTCQNSALSLSNGDSHGLLSENGSIYVISQSAKSSDLCCDKMFGQDQLAMLGEEHTAAVVVRRLDFWLYYVTYFCGGTIGLVYSNNLGQIAQSLGLSSSISTLVTLYSAFSFFGRLLSAVPDYIRNKFYFARTGWLAIALVPTPVAFILLAVSDSAAALKTGTALIGLSSGFIFAAAVAVTSELFGPNSVSVNHNILITNIPIGSLLYGFLAALIYDENAYNVPGELMADTLVCMGRKCYFWTFVWWGGMSVLGLTSSVLLFLRTKHAYDRFERHRISAQSVVS* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1787 583 ProSiteProfiles Major facilitator superfamily (MFS) profile. 363 583 IPR020846 GO:0022857
Gso9g1787 583 SUPERFAMILY MFS general substrate transporter 13 566 IPR036259 -
Gso9g1787 583 Pfam Nodulin-like 14 261 IPR010658 -
Gso9g1787 583 PANTHER NODULIN-LIKE/MFS TRANSPORTER 6 583 - -
Gso9g1787 583 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 6 583 - -
Gso9g1787 583 Gene3D MFS general substrate transporter like domains 365 581 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1787 Gso-Chr9 42327557 42332306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1787 8 580 Nodulin-like Gene Family AT1G31470 56.969 0.0 606
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1787 - - gmx:100775393 1120.53
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1290 1 49330468 49335694 Gso9g1787 9 42327557 42332306 GST
Gso9g1787 9 42327557 42332306 Gso16g0605 16 7589514 7595044 PCT
Gso16g0605 16 7589514 7595044 Gso9g1787 9 42327557 42332306 PCT