Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1785 ATGAAGCAACCATCATCAAAATCAAAGCCATGGAGACCATTCACAGCAAATTGCTGCTCCACAGAGGACCAAACCATTTTTAAAAACTTCAGCAGGTGCAAGCCATCACGTTCGGATTTGTCAAAGAACATTGCACCTTTGCCATCATTCAGAAGGCTCTCTTTCTCGGATCTCAGCCGTTCGTCGTCGACGCGAATCAACGAGGATCTTGCACAGTCTTTTGGGTCGGACTTGTTTGATTTTCAGCTGATTGAGCTGCGTGCCATAACACAGAATTTTAGCAGCAATTTCTTGCTGGGTGAAGGTGGCTTTGGAACAGTGCATAAGGGTTACATAGATGACAATTTGAGGCTGGGTTTGAAGGCACAACCTGTTGCTGTCAAGCTTCTTGACATTGAAGGTTTACAAGGACATCGTGAATGGCTTGCAGAAGTGATTTTTCTTGGGCAGCTAAGGCACCCCAATTTGGTTAAGTTGATTGGATATTGTTGTGAAGATGAAGAACGACTACTTGTCTATGAATTCATGCCACGAGGAAGTTTGGAGAATCACCTCTTCAGAAGGCTAACATCACTGCCATGGGGAACAAGATTAAAAATCGCAACAGGTGCTGCGAAAGGCCTTTCCTTCTTGCATGGAGCTGAGAAACCAGTCATTTATAGAGACTTCAAGACTTCCAATGTTTTGCTTGATTCAGACTTCACAGCAAAATTGTCAGATTTTGGACTTGCAAAAATGGGGCCAGAGGGATCAAACACACATGTTTCAACCAGAGTCATGGGCACTTATGGATATGCAGCCCCAGAATACATCTCCACAGGGCACTTGACCACCAAAAGTGATGTCTATAGCTTCGGGGTAGTCCTGCTAGAACTGCTTACAGGAAGGAGAGCAACAGACAAAACAAGACCAAAGACTGAGCAGAACCTTGTGGATTGGTCAAAACCTTACTTGAGTAGCAGTAGGAGGTTGAGGTACATTATGGATCCAAGGCTTGCAGGCCAATATTCTGTGAAGGGTGCAAAGGAGATGGCACATTTGGCATTGCAATGCATAAGTTTGAATCCTAAAGACAGACCAAGAATGCCAACAATTGTTGAAACTCTTGAAGGCTTGCAACAGTACAAGGACATGGCTGTTACCAGTGGACACTGGCCAGTGTCATCAAAATCTACTAAAAATAGAGTCTCCAACAATAATAACGTGAATGTGAAAGCTAGAGCCGGTGTAAACCACAAGCAACCTTCTCCAGTTCCGAGCAGAAAAACTTGA 1272 0.441 MKQPSSKSKPWRPFTANCCSTEDQTIFKNFSRCKPSRSDLSKNIAPLPSFRRLSFSDLSRSSSTRINEDLAQSFGSDLFDFQLIELRAITQNFSSNFLLGEGGFGTVHKGYIDDNLRLGLKAQPVAVKLLDIEGLQGHREWLAEVIFLGQLRHPNLVKLIGYCCEDEERLLVYEFMPRGSLENHLFRRLTSLPWGTRLKIATGAAKGLSFLHGAEKPVIYRDFKTSNVLLDSDFTAKLSDFGLAKMGPEGSNTHVSTRVMGTYGYAAPEYISTGHLTTKSDVYSFGVVLLELLTGRRATDKTRPKTEQNLVDWSKPYLSSSRRLRYIMDPRLAGQYSVKGAKEMAHLALQCISLNPKDRPRMPTIVETLEGLQQYKDMAVTSGHWPVSSKSTKNRVSNNNNVNVKARAGVNHKQPSPVPSRKT* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1785 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 218 230 IPR008271 GO:0004672|GO:0006468
Gso9g1785 423 Gene3D Phosphorylase Kinase; domain 1 55 175 - -
Gso9g1785 423 ProSiteProfiles Protein kinase domain profile. 93 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1785 423 PANTHER OS01G0588500 PROTEIN-RELATED 34 405 - -
Gso9g1785 423 MobiDBLite consensus disorder prediction 384 423 - -
Gso9g1785 423 Pfam Protein tyrosine and serine/threonine kinase 99 369 IPR001245 GO:0004672|GO:0006468
Gso9g1785 423 MobiDBLite consensus disorder prediction 384 407 - -
Gso9g1785 423 PANTHER SERINE/THREONINE-PROTEIN KINASE PBL15-RELATED 34 405 - -
Gso9g1785 423 Gene3D Transferase(Phosphotransferase) domain 1 176 390 - -
Gso9g1785 423 ProSitePatterns Protein kinases ATP-binding region signature. 99 128 IPR017441 GO:0005524
Gso9g1785 423 SUPERFAMILY Protein kinase-like (PK-like) 74 372 IPR011009 -
Gso9g1785 423 CDD STKc_IRAK 99 372 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1785 Gso-Chr9 42321037 42324864 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1785 67 385 Glycoside Hydrolase AT3G07070 49.536 1.66e-101 306
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Gso9g1785 PK_Tyr_Ser-Thr 4.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1785 - - gmx:100814241 782.326
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1288 1 49322951 49328826 Gso9g1785 9 42321037 42324864 GST