Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1778 ATGGCTAGATCCAAACGACGGAGGTTTACCAGTGGTAGCAATGTCAGACCCGGGACTATGACTTTCGAGCCTATTTTGGAAGAAGGAGTGTTCCGTTTTGATTGTTCTGTAAATGTTAGAGATGCAGTACCCCCCAGTATTTCTTTTTTGAATACCAATGATAGAGACATATCTATCTATAGTGAGAAGGTTCCGCTCTATACCCCGACGTTTGCGTGTCGTTCAGAGAAGCAGGTTGTCAAACTTGAGCTGCCTGTAGGTTCTTCCCTTTATGGAACGGGAGAAGCTAGTGGTGAGCTCGAGAGGACAGGCAAAAGAGTTATCACATGGAACACGGATGCATGGGGTTATGGACCGGGAACTACCTCCTTGTACCAATCACATCCATGGGTGTTAGCTGTTCTTCCAAACGGTGAGGCGATAGGAATTCTTGCCGACACTACAAGGCGCTGTGAGATTGATCTGAGGAAAGAATCAACAATACAGTTTGTTGCTCCATCCGCATATCCTGTCATTACATTTGGTCCTTTTGCTTCACCCACAGCAGTGTTGATATCTCTATCAAAAGCAATTGGAACTGTATTTATGCCCCCAAAATGGTCATTAGGCTATCATCAATGCCATTCGAGATATTTATCTGACGAGAGAGTTCTGGAGGTTGCAAAAACATTCCGGAAAAAGAGCATACCTTGTGATGTGATATGGATGGATAACAGTTACATGGATGGTTTTCGTTGTTTCACCTTTGACAAGGAGCGTTTTCGAGATCCCACGTCTTTAGTGAAAGATCTCCATTATAGTGGTTTTAAAGCTATTTGGATGCTTGATCCTGGAATAAAGCAGGAAGAGGGTTATTTTGTATATGATAATGGTTCTAAAAAAGATGTTTGGGTCCAAAAGGAAGATGGAAATCCTTATGTTGGAGAGGTGTGGCCTGTTCGATGTGTCTTCCCTGACTATACACAGTCAAAAGTTCGTGCATGGTGGGCAAATTTAGTTAAAGACTTCATATCCAAAGGTGCTGATGGTATATGGAATGATATGAATGAACCATCTATCTTTAAGGATGTAACAAAAACAATGCCTGATAGCAATGTTCATAGTGGAGATAGTGAACTTGGAGGCTGTCAGAATCATTCTTTCTATCACAATGTGTATGGTCTTCTGATGGCAAGATCAACCTATGAAGGCATGAAACTGGCTAATGAAAAGAAGCGTCCTTTTGTTCTTTCAAGAGCTGGATTTGTTGGCAGCCAAAGGTATGCTGCAACATGGACTGGAGATAATCTTTCAACCTGGGAGCATCTTCATATGAGTATCTCCATGGTACTTCAGCTGGGACTTAGTGGTCAGCCACTTTCAGGTGCGGATATTGGTGGATTTGCTGGAAATGCATCACCTAGACTTTTTGGAAGGTGGATGGGTGTTGGTTCCTTGTTTCCCTTTTGCAGAGGGCATTCTGAAGCTTGCACCACTGACCATGTACCTTGGTCTTTTGGGGAAGAGTGTGAAGAAGTTTGCCGATTGGCATTGAAGAGGCGCTACCGCCTGATCCCACTTATCTACACTCTTTTTTATTTTGCTCATACATGGGGCACACCAGTGGCAACCCCTACTTTCTTTGCTGATCCAAAAGATCCTAGCCTGAGGAAGCTTGAAAATTCATTTTTGCTTGGTCCAATCTTAGTGTTTGCAAGCACCTTACGTAGACAGGGTTTGGATAAGTTGGAGATTACTTTACCTAAGGGGATATGGCTGAATTTTGATTTCAACGATGCACATCCGGATTTGCCAGCTTTATACTTAAAAGGTGGCTCGATAATTCCTGTGGGCCTCCCTCATGAACATGTTGAAGAGGCTAATCCTTCAGATGACTTGACTCTTTTTGTGGCTTTAGATGATCATGGGAAAGCTGAAGGTGTTCTATTTGAAGATGATGGTGATGGATACGAATTCACAAAAGGCAATTATTTATTAACACATTATGTGGCTGAACTTAAATCATCAGTTCTTACTGTGAGTGTCCAGAAAACTGAAGGGTCATGGGAAAGACCTAAACGCCGCCTGCATATTCAATTATTGCTGGGTGGGGGTGCAATGCTTGATACATGGGGAACTGATGGAGAAGTTCTGCAACTAATTTTGCCTTCGGAAGATGAGGTGTCGGAGCTAGTATCTACTAGTGAGAAGAATTACAAGGACCGCTTGGAAAATGCAACTCCAATTCCTGATGTAGAAGTAGAAGTAGAAGTAGAAGAGGTTTCTGGACCCATGGAAACACAGATTTTAAGAATTCCCATTGAACAGCAAAGTGACATAGAAGACCATGTTAGTCAGACGCCTGAGGAGGCAAGTACGCCAACTGATGGAGCGATAAATATTGCTGATTGTAGTGACGCATTCAAGACTACAGAGCTTTTCCCTTCCCGAGATGCTGTGCTGAATTGGGCTCGAGAAGTTGCAAAAGAGAATGGATTTGTCCTTACTATTTTGAGGTCAGAAACACATACAGGAAGTAATAAAAAGAATATTAGAGGGAAGACATATGTAATTCTGGGTTGTGAAAGGAGTGGAAAATATAGACCATACAAGAATACATTATCTAAGGTGACTAGTTCCAAAAAATGTGAGTGCCCCTTCAAGCTAAAGGGAAAAGCTTTGAACAAGGATGAAGGGTGGATTGTTAAGGTAATGTGTGGTTATCACAACCACGACTTAGGGGAAACATTAGTGGTGGGTCATTCATATGCTGGTCGACTAACTGCTGAAGAGAAGTCATTGGTCATTGATATGACAAAGAAAATGGTGGAGCCGAGAAACATACTACTAACATTGAAGGATCACAATAATGACACTACTATCAGGCATATTTACAATGCTCGACAAGCATATCGATCTTCTCAGAAAGGTCCTAGGACAGAAATGCAACACCTACTAAAGTTATTGGAACATGATCAATATGTGTGTTGGAGTAGAAAGGTGGACGATTCTGATGCTATCAGAGATATATTTTGGGCACATCCAGATGCCATCAAACTTTTAGGTTCTTTCCACACTGTCTTGTTCCTTGACAATACTTATAAAGTCAACAGGTATCAATTGCCACTGCTTGAGATTGTTGGTGTTACATCCACAGAGTTAACATTCTCTGTTGCATTTGCTTATATGGAGTCGGATGAAGTTGATAACTTCACTTGGGCACTACAGAAGCTAAGAGAACTGATTGTCAAAGACAACGAGATGCCTCCAGTAATTATAACTGTTAGAGACATTGCTCTGATGGATGCAGTGCAGGTGGTCTTTCCTAGCTCTTCTAATTTGTTATGTCGTTTTCATATAAGCAAGAATGTGAAGGCTAAATGCAAGTTGATAGTTCATCCGAAGGAGAAATATGACTTGGTGATGGATGCATGGGATAGTGTGATGAATTCTCCCAACGAGGGTGAGTATATGCAACGGTTGACATTACTTGAAAAGGTTTGCTCAGATTTTCCTACTTTTGGCGATTATGTGAAAAATACATGGCTGATTCCTCACAAGGAAAAATTTGTTATGGCATGGGTAGATCGAGTGATGCATTTGGGTAACACTACAATCGACAGGTTTGAAACAGCACATTGGAGGCTGGAGAACTTGCTTCAAGATAGTGGGGGGGATATGTGTAGTTGTTGGGATGCTGTGAACAACATGATTAAATTGCAACACACACAGATTAAGGTGTCGTTTGAGAAAAGTATAAACATTGTGGAATACAATGATCCATTCTATAGCAAGCTGCGGGGATTTGTATCAAGGAATGCATTGAGTTATATAGCTGACCATTATGACCGAGTTAAGACCGTTGGTATTGATATTGATGGTTCTTTATGTGGATGCACAATTAGAACTACACATGGTCTACCTTGTGCGTGTGAACTTGCTAAGTATAGTAGGACGTGGCACCCAATTCCCTTGCAAGCAATTCATGTTCATTGGAGGACATTAAACTTCAGTGACCAAGAAATGAACAATGAGGGGCTCGAGTTAGCGTTGCAACGTGAAGTGGATGCTTTGCACAATCAATTTCAGGAACTTGATTATGCTGGAAAAATTACTTTGAAGGCCAAATTGCGTGAACTAGCATTTCCTGATGCAATTTTAATGTGTCCGTCTCCTGAAAATTACTTTGATGCTCCAAAGGCTCTGGGCTTCCGCGAGAGACAAATCAATTGA 4212 0.4157 MARSKRRRFTSGSNVRPGTMTFEPILEEGVFRFDCSVNVRDAVPPSISFLNTNDRDISIYSEKVPLYTPTFACRSEKQVVKLELPVGSSLYGTGEASGELERTGKRVITWNTDAWGYGPGTTSLYQSHPWVLAVLPNGEAIGILADTTRRCEIDLRKESTIQFVAPSAYPVITFGPFASPTAVLISLSKAIGTVFMPPKWSLGYHQCHSRYLSDERVLEVAKTFRKKSIPCDVIWMDNSYMDGFRCFTFDKERFRDPTSLVKDLHYSGFKAIWMLDPGIKQEEGYFVYDNGSKKDVWVQKEDGNPYVGEVWPVRCVFPDYTQSKVRAWWANLVKDFISKGADGIWNDMNEPSIFKDVTKTMPDSNVHSGDSELGGCQNHSFYHNVYGLLMARSTYEGMKLANEKKRPFVLSRAGFVGSQRYAATWTGDNLSTWEHLHMSISMVLQLGLSGQPLSGADIGGFAGNASPRLFGRWMGVGSLFPFCRGHSEACTTDHVPWSFGEECEEVCRLALKRRYRLIPLIYTLFYFAHTWGTPVATPTFFADPKDPSLRKLENSFLLGPILVFASTLRRQGLDKLEITLPKGIWLNFDFNDAHPDLPALYLKGGSIIPVGLPHEHVEEANPSDDLTLFVALDDHGKAEGVLFEDDGDGYEFTKGNYLLTHYVAELKSSVLTVSVQKTEGSWERPKRRLHIQLLLGGGAMLDTWGTDGEVLQLILPSEDEVSELVSTSEKNYKDRLENATPIPDVEVEVEVEEVSGPMETQILRIPIEQQSDIEDHVSQTPEEASTPTDGAINIADCSDAFKTTELFPSRDAVLNWAREVAKENGFVLTILRSETHTGSNKKNIRGKTYVILGCERSGKYRPYKNTLSKVTSSKKCECPFKLKGKALNKDEGWIVKVMCGYHNHDLGETLVVGHSYAGRLTAEEKSLVIDMTKKMVEPRNILLTLKDHNNDTTIRHIYNARQAYRSSQKGPRTEMQHLLKLLEHDQYVCWSRKVDDSDAIRDIFWAHPDAIKLLGSFHTVLFLDNTYKVNRYQLPLLEIVGVTSTELTFSVAFAYMESDEVDNFTWALQKLRELIVKDNEMPPVIITVRDIALMDAVQVVFPSSSNLLCRFHISKNVKAKCKLIVHPKEKYDLVMDAWDSVMNSPNEGEYMQRLTLLEKVCSDFPTFGDYVKNTWLIPHKEKFVMAWVDRVMHLGNTTIDRFETAHWRLENLLQDSGGDMCSCWDAVNNMIKLQHTQIKVSFEKSINIVEYNDPFYSKLRGFVSRNALSYIADHYDRVKTVGIDIDGSLCGCTIRTTHGLPCACELAKYSRTWHPIPLQAIHVHWRTLNFSDQEMNNEGLELALQREVDALHNQFQELDYAGKITLKAKLRELAFPDAILMCPSPENYFDAPKALGFRERQIN* 1404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1778 1403 CDD GH31_glucosidase_II_MalA 192 532 - -
Gso9g1778 1403 Gene3D - 517 601 IPR013780 -
Gso9g1778 1403 PANTHER BNAA01G23630D PROTEIN 15 772 - -
Gso9g1778 1403 CDD GH31_N 80 192 - -
Gso9g1778 1403 SUPERFAMILY Galactose mutarotase-like 71 164 IPR011013 GO:0003824|GO:0005975|GO:0030246
Gso9g1778 1403 Gene3D glycosyl hydrolase (family 31) 34 175 - -
Gso9g1778 1403 PANTHER ALPHA-GLUCOSIDASE 15 772 - -
Gso9g1778 1403 Pfam Glycosyl hydrolases family 31 179 608 IPR000322 GO:0004553|GO:0005975
Gso9g1778 1403 Pfam MULE transposase domain 1020 1116 IPR018289 -
Gso9g1778 1403 Gene3D - 605 738 IPR013780 -
Gso9g1778 1403 SUPERFAMILY (Trans)glycosidases 189 532 IPR017853 -
Gso9g1778 1403 ProSitePatterns Glycosyl hydrolases family 31 active site. 343 350 IPR030458 -
Gso9g1778 1403 SUPERFAMILY Glycosyl hydrolase domain 534 593 - -
Gso9g1778 1403 Gene3D Glycosidases 195 516 - -
Gso9g1778 1403 Pfam Domain of unknown function (DUF5110) 626 694 IPR033403 -
Gso9g1778 1403 Pfam Galactose mutarotase-like 89 154 IPR025887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1778 Gso-Chr9 42220303 42234342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1778 20 771 Glycoside Hydrolase AT3G23640 69.814 0.0 1138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Gso9g1778 Glyco_hydro_31 1.6e-126 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1778 - - gmx:100782358 2873.96