Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1777 ATGTCCCTTCTCAGCCGATTCTTCTACAAGCGCCCCCCTGACGGCTTACTCGAATTCTCCGACAGAGTATACGTCTTCGATTCCTGCTTCTCGACGGAGGCACTCCCGGACGGAATGTACAGCCTCTACCTCCGCCAAATCCTCTCTGACCTCCACGAGGACTTCCCGGAATCCTCCTTCGTGGCCCTCAACTTTCGCGACGGCGACCACCGCAGCCGTTTCTCCCGCGTCCTCTGCGACCTGGACGCCACATTCGTCGTCGACTACCCAAAGCAGTACGAGGGCTGCCCCCTCCTCCCCCTCTCCCTCCTCCACCACTTCCTCCGCCTTTGCGACTCCTGCCTCGCCGACCCCGGCGCCCTGATCCTCCTCCACTGCGAGCGCGGCGGCTGGCCCCTCCTCGCCTTCCTCCTCGCCGCCTTCCTCGTCTTCCGCAAGGCCGCGCAGACCGGGGAGCGCCGGATTCTCGAGATGGTTCATAAGGAGGCGCCGAAAGGGTTGCTGCAGCTGTTGTCGGCGCTGAACCCGCTGCCGTCGCAGCTGCGGTATGTGAAGTATGTGGCCAGGAGGAACATTGGGGCGGAGTGGCCCCCACCGGAGAGGGCACTGTCTTTGGATTGTGTTATTCTCAGAGGGGTTCCTGGGTTTGATGGGGGCAATGGGTGCAGGCCACTGTTTAGGATTTTTGGCCGGAATTTGCTTAGTAAAGGGGGGCTTTCAACACAGATGATTTATAATATGCATAAGAAGAAGAAGACTTTGAGGCACTATAGACAGGCAGACTGTGATGTGATTAAGATTGATATTCAATGCCTAGTGAAAGGGGATGTGGTGTTGGAGTGTGTCCATTTGGATTTGGATCCGGAGAGGGAAGTGATGATGTTTCGGGTGATGTTCAACACGGCGTTTATTCGGTCCAACATTTTGATGCTGAATTCTGAGAACTTGGACATTCTTTGGGATTCGAAGGAGCGGTATCCGAAGGGCTTCCGGGCTGAGGTTTTGTTTGGGGAGGTTGAAAGCATAAGTCCTCCAAGGGCTCAAACAAGTATTTTAGATGGTGAGGTGAAAGGTGGATTGCCTATTGAGGCATTTTCGAGGGTTCAAGAACTTTTTAGTGGTGTAGAATGGGTTGAAAGTGGGGATGCTGCTGCTGCCTGGCTGCTCAAACAGCTTACAGTCTTAAATGATGCCAAAGAGCTTTCAAGGTTTCAAGGTAGAGGAAGTTGGTATTCATCACCTGCTGACTCTGACTCTGAAAATAATGAATCAAGCACAGCTGATAGTTCAGATGAGGCCTTTGATGTTATTCCCAAGTCTTATGCTGATCCTTCAAAATTATTGATATCTGACAACCCTGATTTGGTCCATTTAGCTTTTGAGAACAATGGTGGAGATTATGTAAATCTCACTTCAAGAACACCTGATCAGTCATTGACTGATAATGTTTCATTACCTCATCATGCTCCCAGAAAGGAATATTCTCCTTGTTCCTCTCCACCATCACCTTCACCAGTTCCCGCTACTCAACCTTTTCCAACACCGGCACCACCACTTCCCACATCAATGCCTATACAGCCAGATTTAGCTCCTCCCTTGCCTCCGCATCAGATAGATCAGAATGTGAACAGTGCTTCTACATTGCCTTCACCTCCTCCTCCTATAGTTTCCAATGCTCCTAGTCAACCTCCACCGCCTCCTCCTCCTCCTCCACTTCCTCCACGATCTGTACAAACTGGTTCAGCTCCACCTCCTCCAGGACCTGTACGGACAGGCTCGGTACCACCGCCTCCACCTCCTCCAGGATCTGTACAAACTGGTTCAGCTCCACCACCTCCACCTCCTCCAGGTCCAGTACGAACAGGCTCGGTACCACCGCCTCCACCTCCTCCAGGATCTGTAAAAACTGGTTCAGCTCCACCACCTCCACCTCCTCCAAGTCCAGTACGAACAGGTTCAGCCCCACCGCCACCTCCACCTCCTCCATGTCCTGTACGAGCAGGTTCAGCCCCACCTCCTCCTCCTCCTCCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCCCTACCTCCTCCTCCTCCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCCCCACCTCCTCCTCCTCCTCCTCCTCTAGGTCCTGTACGAACAGGTCCAGCCCCACCTCCTCCTCCTCCTCCTCCTCCAGGTCCTGTACGAACAGGTTCAGCTCCACCACCTCCTCCCCCTCCAAGTGTACGAACAGGTTCAGCTCCACCACCACCACCACCGGCACCAAAACCTCCAGGTGTTCTTCCTCCTCCACCTGGCCGTGGTGCATCACCGATGCCACCTCCACCACCTGCAGCTAGGGCCCCTGGTGTGGCACCACCACCAGGCAAAGCTTCAACAGCAAATGTTGGAAGAGGTCGTGGTACTGGTGGTACTGTTAATGCTCCTAAGAAAACTTTGCTAAAACCCCTACACTGGGTGAAAGTTGCTCGAGCAGCCAAGGGAAGTCTATGGGCTGATTCACAGAAACAGGATAGTGGAACAAGGGCTCCTGAGATAGATATTTCAGAACTTGAGAGCCTGTTTTCAGCAGCATCTACTTCTGATGGGAGCAGCACTAAAGGTGGAGGTCGGCGTGGTCCTAATATTAACAAACCTGAGAAAGTACAATTGGTTGATTTGCGTAGAGCATATAATTGTGAAATAATGCTCTCTAAAATCAAAATTCCTTTGCCAGATATGCTTAAAGCAGTCCTGGCATTGGATTCTGCAATTCTGGATATTGATCAGGTTGAGAATCTCATCAAGTTCTGTCCTACAAAGGAAGAGATGGAGATGTTAAAGAATTATACAGGAAACAAGGAAATGCTTGGAAAGTGTGAACAGTTTTTTATGGAGCTGATGAAGGTTCCACGTGTGGAATCCAAATTAAGGGTTTTTGCTTTTAAAATCACCTTTTCTTCTCAGGTGAATGATTTGAAGTTAAATTTGAACACAATCAACAATGCAGCCAGAGAGGTGAAAGAATCTGGAAAATTGCGTCAAATAATGCAGACCATTCTTACTCTGGGCAATGCCTTGAATCAAGGAACAACACGAGGATCAGCTGTTGGATTCAAATTGGATAGCCTTCTTAAATTATCTGATACCCGTGCAAGAAATAACAAAATGACTTTAATGCATTATTTGTGTAAGCTTCTTGCTGAGAAAATGCCAGAATTGCTAGATTTTGATAAGGATCTTGTCCATTTGGAAGCAGCTTCTAGGATTCAACTAAAAGCATTGGCTGAAGAAATGCAAGCTGTGAGTAAAGGTTTAGAGAAAGTTGAGCAAGAACTCGCTGCTTCTGAAAATGATGGTGCTATATCTACAGGATTTCGTAAGGTGTTGAAGAATTTTCTTGATATTGCTGAAGCTGATGTGAGGTCTCTTATATCATTGTATTCTGAAGTGGGAAGAAGTGCAGACTCTTTGTCCCAGTACTTTGGAGAGGATCCAGCTAGATGCCCTTTTGAACAAGTGACACAAATCCTTGTTGTCTTTGTCAAGATGTTCAACAAGTCAAGGGAGGAAAATGAAAGGCAGGCGGATGCTGAAAAAAAGAAATTAGAGAAAGAAGCCTTGAAGGAAAGGACAGCAAATAACTTGCATTCCAAAAAAGATGGTGTTCGATAG 3672 0.4918 MSLLSRFFYKRPPDGLLEFSDRVYVFDSCFSTEALPDGMYSLYLRQILSDLHEDFPESSFVALNFRDGDHRSRFSRVLCDLDATFVVDYPKQYEGCPLLPLSLLHHFLRLCDSCLADPGALILLHCERGGWPLLAFLLAAFLVFRKAAQTGERRILEMVHKEAPKGLLQLLSALNPLPSQLRYVKYVARRNIGAEWPPPERALSLDCVILRGVPGFDGGNGCRPLFRIFGRNLLSKGGLSTQMIYNMHKKKKTLRHYRQADCDVIKIDIQCLVKGDVVLECVHLDLDPEREVMMFRVMFNTAFIRSNILMLNSENLDILWDSKERYPKGFRAEVLFGEVESISPPRAQTSILDGEVKGGLPIEAFSRVQELFSGVEWVESGDAAAAWLLKQLTVLNDAKELSRFQGRGSWYSSPADSDSENNESSTADSSDEAFDVIPKSYADPSKLLISDNPDLVHLAFENNGGDYVNLTSRTPDQSLTDNVSLPHHAPRKEYSPCSSPPSPSPVPATQPFPTPAPPLPTSMPIQPDLAPPLPPHQIDQNVNSASTLPSPPPPIVSNAPSQPPPPPPPPPLPPRSVQTGSAPPPPGPVRTGSVPPPPPPPGSVQTGSAPPPPPPPGPVRTGSVPPPPPPPGSVKTGSAPPPPPPPSPVRTGSAPPPPPPPPCPVRAGSAPPPPPPPPPPGPVRTGSALPPPPPPPPGPVRTGSAPPPPPPPPLGPVRTGPAPPPPPPPPPGPVRTGSAPPPPPPPSVRTGSAPPPPPPAPKPPGVLPPPPGRGASPMPPPPPAARAPGVAPPPGKASTANVGRGRGTGGTVNAPKKTLLKPLHWVKVARAAKGSLWADSQKQDSGTRAPEIDISELESLFSAASTSDGSSTKGGGRRGPNINKPEKVQLVDLRRAYNCEIMLSKIKIPLPDMLKAVLALDSAILDIDQVENLIKFCPTKEEMEMLKNYTGNKEMLGKCEQFFMELMKVPRVESKLRVFAFKITFSSQVNDLKLNLNTINNAAREVKESGKLRQIMQTILTLGNALNQGTTRGSAVGFKLDSLLKLSDTRARNNKMTLMHYLCKLLAEKMPELLDFDKDLVHLEAASRIQLKALAEEMQAVSKGLEKVEQELAASENDGAISTGFRKVLKNFLDIAEADVRSLISLYSEVGRSADSLSQYFGEDPARCPFEQVTQILVVFVKMFNKSREENERQADAEKKKLEKEALKERTANNLHSKKDGVR* 1224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1777 1223 MobiDBLite consensus disorder prediction 409 432 - -
Gso9g1777 1223 Pfam C2 domain of PTEN tumour-suppressor protein 199 337 IPR014020 -
Gso9g1777 1223 MobiDBLite consensus disorder prediction 862 877 - -
Gso9g1777 1223 Gene3D - 197 342 - -
Gso9g1777 1223 ProSiteProfiles Formin homology-2 (FH2) domain profile. 810 1210 IPR015425 -
Gso9g1777 1223 Gene3D Formin, FH2 domain 811 1196 IPR042201 -
Gso9g1777 1223 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Gso9g1777 1223 SMART PTEN_C2_2 198 338 IPR014020 -
Gso9g1777 1223 MobiDBLite consensus disorder prediction 862 885 - -
Gso9g1777 1223 SUPERFAMILY Formin homology 2 domain (FH2 domain) 741 1204 - -
Gso9g1777 1223 MobiDBLite consensus disorder prediction 1188 1223 - -
Gso9g1777 1223 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 339 IPR035892 -
Gso9g1777 1223 MobiDBLite consensus disorder prediction 496 534 - -
Gso9g1777 1223 Gene3D Protein tyrosine phosphatase superfamily 15 191 IPR029021 -
Gso9g1777 1223 Pfam Formin Homology 2 Domain 815 1185 IPR015425 -
Gso9g1777 1223 PANTHER FORMIN-J 1 1214 - -
Gso9g1777 1223 Coils Coil 989 1009 - -
Gso9g1777 1223 Coils Coil 1185 1208 - -
Gso9g1777 1223 Coils Coil 1091 1118 - -
Gso9g1777 1223 MobiDBLite consensus disorder prediction 469 816 - -
Gso9g1777 1223 MobiDBLite consensus disorder prediction 547 790 - -
Gso9g1777 1223 MobiDBLite consensus disorder prediction 469 484 - -
Gso9g1777 1223 MobiDBLite consensus disorder prediction 409 431 - -
Gso9g1777 1223 SMART it6_source 523 1220 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1777 Gso-Chr9 42209950 42219691 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1777 772 1222 FH2 protein (formin) Gene Family AT1G31810 76.211 0.0 653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1777 - - gmx:100781274 1069.3