Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Gso9g1776 | ATGGGTTACGATTCGGATAGCCCCTCGCAAGATGGGAGGGATGAAGACGACGAAGAAGAATATGAGGATTCTGGCAAGGGTAATCGTTTTCTTGGGTTCATGTTTGGAAATGTAGATAACTCTGGTGATCTCGATGTTGATTATCTTGATGAGGACGCAAAGGAGCATCTTTCTGCATTAGCTGATAAGCTGGGTCCATCACTGACAGATATAGATTTGTCAGGAAAATCACCACAAACACCACCTGACGTTGTTGAACAAGACTGTGATGTAAAAGCTGAAGACGCTGTTGATTATGAAGATATTGATGAAGAATATGATGGTCCAGAGACAGAAGCTGCCAATGAAGAGGACTATTTATTGCCAAAAAAAGAATTTTTCTCTTCTGAAGCCTCTGTATGTTTGGAATCCAAAGCTTCTGTCTTTGATGATGAAAATTATGATGAAGAATCTGAAAAGGAGCAAGACTTTGTGAATGACGATTCTAAAGTTTATAACATCCCTTTAGCTGGGGAGCAGGAAGAGAGTTTTGTGGATGCATCTAAAGAAGAGAGTTCGCTTGAACATGAATTACATGTTGACTCACCGCAGACTGAAGAGTTGGATGCTGATGTACAAAAACTTGAGGAGGATGGCCCTGAAGTTCAGAAAAGGTCTATGGCTATGCCATTGCCTGTTTTATGTGTGGAAGATGGTGTGGCAATTTTACGTTTCTCTGAAATCTTTGGCATTCATGAACCTCTCAGAAAGGGAGAAAAGAGAGAGCATCGACATTCTATTCCTAGAGATAGATACAAGTCTTTCGATTTAACTGATGATTTTGTAGAAGAGGATGAAGAGGAATTTCTCAAGGGCTTCTCCCAGAGTCTCTCTCTTTCTAAACAGGTTTGTGTAGTTCATAATGATGTATCAGAAAGCAATGATGTTGACTTGGAGTTTCCAAAATTTGGATTTCTTCATGCGGATGCCTCAGTGGACAGGAAAGATGATCAACAATCAAAGGACTCGTGTCATAGTGCTGAACCGATGAAAGGGGATTTTGTAGAAGATCATTTCTGGAAAGATCATCCTTTCATGTTGGCCAACTTTTATCCTCTTGATCAGCAAGACTGGGAAGATAAAATCCTTTGGGGCAATTCTCCTGTTCCAAGTTATAATAATGTTGAAAGCTGTGAAATTTCTGGACCCGAGTTGGGAGCTTCTGGTGGCAGTGAAATAGAAATTGAAAGTGGGATCCATAATATTCAGATGGAGCCTCAGAAGGTACTGGAGGATAAAAATCATAATGTCTTAATGCGCAGCTCTCCTGTCAAATTGGAGCCCTTTGGCTCAAGGGATTCTTCTGGAGCTAAGACCAATTTAATATCCAGAAGTCTCTTTCACCCCCAACTTCTAAGGTTAGAATCCAGATCTGAAGTGGATAGTTCTAGTCTTGCAGATGGAAGAGATGCAGAGATATCTGAGCATAATCAAAGTGGTCAAGTGAAGCGCTTTACCAAGGTTATATCACAAAACAGAGACATGATGGAGGGCTCCTGGTTAGACAAGATAATATGGGAGGAGCTTGATCAGCCTACAGTGAAACCGAAGCTTATCTTTGATCTTCAGGATGATCAAATGCACTTTGAAGTTTTAGATACCAAGGATGGTACACATCTTTGCCTTCATGCTGGGGCTATGATTTTAACTCATTCTTTAAAATTAAGCAGCGGGGATTCTTCTGAGCTACCAGGACATGGAAGTCAATATGGATGGCGATATGTTGCTAATGACAAACACTATTCAAACCGTAAAACTTCTCAGCAACTGAAATCAAATTCCAAAAAACGCTCAGCTCATGGTGTCAAAGTTTTTCACTCACAACCTGCACTGAAGCTGCAGACAATGAAATTGAAATTGAGCAATAAAGATATTGCAAATTTTCACCGGCCAAAAGCACTATGGTATCCCCATGACAATGAGGTGGCTGTCAAAGAACAAGGGAAATTGCCAACACAAGGACCCATGAAAATTATTATAAAGAGTTTGGGTGGCAAGGGGAGTAAACTGCATGTCGATGTTGAAGAAACTCTCTCTTCTGTTAAAGCAAAAGCTTCCAAAAAGCTAGATTTTAAGGTATCAGAAACAGTGAAAACATTTTATTTGGGGAGGGAGCTTGAAGATCACAAGTCACTTGCTGCACAAAATGTTCAACCAAACTCCTTGTTACATCTTGTTCGTACAAAGATACATTTGTGGCCAAAAGCACAAAGGGTTCCTGGTGAGAACAAGTCCTTGCGTCCTCCTGGGGCATTCAAGAAAAAGTCTGATCTGTCTGTAAAAGATGGACATGTTTTTCTGATGGAGTATTGTGAAGAAAGGCCTTTACTTTTGAGCAATGTTGGAATGGGTGCAAGACTTTGTACATACTATCAAAAATGCTCACCAGATGACCAATCTGGCTCCTTATTACGCAACACAGATAGTAGATTGGGGCACATTATTTCCCTGGATCCTGCTGATAAATTTCCTTTCCTTGGAGATTTAAAGCCTGGTTGCAGTCAGTCATCACTAGAGACAAATATGTATAGAGCACCCATATTTCCCCATAAAGTTCCATTAACTGACTACCTGCTGGTTCGTTCATCAAAGGGAAAGCTATCATTAAGGCGCATTGATAAAATTAATGTTGTCGGACAGCAGGAGCCTCTCATGGAGGTATTATCACCTGGAAGTAAAAATCTTCAGACTTACATGATGAACAGGCTATTGGTACACATGTGCCGTGAATTCCAAGCAGCAGAGAAGCGACATTTGCCTCCGTATATTGGTGTTGATGAATTTCTCTCACAGTTTCCTTACCAATCAGAAGCATCATTCCGTAAGAAAATCAAGGAATATGCCAATTTACAGAGGGGAACAAATGGACAGTCAATTTTGGTTAAAAAGCGAAATTTTCGCATTTGGTCAGAGGATGAATTGAGAAAAATGGTTACACCAGAGCTTGTTTGTGCTTACGAAAGCATGCAAGCTAGCCTCTACCGTCTAAAACATTTAGGAATTACTGAAACACACCCGACTAATATTTCATCTGCAATGAGTCGTCTTCCTGATGAAGCAATAGCATTGGCTGCTGCATCACACATCGAGAGGGAACTGCAGATTACTCCTTGGAACTTGAGTTGCAATTTTGTTGCCTGTACAAGCCAGGGTAAGGAAAATATTGAACGAATGGAAATTACTGGTGTTGGTGATCCTTCTGGTCGTGGCATGGGTTTTAGCTATGCTCGGGCACCTCCAAAGGCACCAGTGTCTAGTGCAATGGTGAAAAAGAAAGCAGCTGCTAACCGTGGAGGTTCTACTGTTACCGGTACAGATGCTGATCTACGTAGATTAAGCATGGATGCTGCACGAGAGGTTCTTCTTAAGTTCAATGTTCCTGAGGAAGTCATTGCAAAACAAACTAGGTGGCATCGCATTGCTATGATACGGAAACTTTCAAGTGAACAAGCTACATCTGGGGTTAAGGTTGATCCAACAACTATCAGCAAATATGCTCGTGGCCAGCGAATGTCCTTTCTTCAGTTACAGCAGCAGACCAGAGAGAAATGCCAGGAGATTTGGGATCGACAAGTTCAAAGTCTGTCAGCTGTAAATGGTGATGAAAATGAAAGTGATTCAGAAGGGAATAGTGATTTGGATTCTTTTGCTGGAGATCTGGAAAATTTACTTGATGCTGAGGAGTGTGAAGAAGGAGAAGAGGGTACCAATGACTTAAAACGTGATAAGGGAGATGGCGTTAAGGGTCTTAAAATGAGAAGACGCCCAACTTTAGCTCAGGCAGAGGAGGAAATAGAAGATGAAGCAGCTGAGGCTGCTGAATTATGCAGGCTGCTTATGGATGATTATGAAGCTGACAGAAAGAAAAAGAAGAAAGCTAAAGTTATGGTGGGAGAAGCAAGATTGGTACCGAAGATGCAATCAAAATTTTCCTTTGACAATGCTGAACAAGTTAAGCAAATAACTAATACTTTACAATTAGATGGAACTAATCACTTGAAAGAGGATGCAATCACAGATCTTAGGGAGGAGGAAAACGTTCCTGCTAAAAAAAGCAAATCACTGAAGGTCAATAAAGCCAAGAAGAATGATATTATGCCTATTAGTATACCCAATAAAAAAATCAAATTGAATATGGGAGAAGGAATTAAGAACCAGGTATTTAAGGAGAAAAAACCATCAAGGGAAACTTTTGTTTGTGGAGCATGTGGTAAGGCTGGGCACATGCGAACGAATAAGAACTGTCCAAAATATGGTGAAGATCTAGAAACTCAACTTGAATCTGCAGACATGGAAAAATCATCTGGAAAATCTAGCTTTGTGGATCCCTCTAGTCTCTCCCAGCATAAAGCTCCCTCCAAAAAGTCAATGTCTAAAAGCGCAACAAAAGTTGCTCCTGTTGACAATTCAACAAAAATTCCATTGAAATTCAAATGCAGCTCCACAGAGAAATCTTCTGATAAACCTGCAGTAGAAACCCTGCAGAGTTCTGACAAGCCAGTCACTTCTGACTCAGAAACTGCAAAGTCTGCTAAGGTTAATAAGATAATTATTCCCAAGAAAGTGAAACCAGATGATACGCTGGCTGAATCTCGTAAGCATGCTATTGTTATACGGCCTCCTACTGATTCAGGTAGAGGACAGGTTGATTCTCATAAGTTCCCAATTAAAATACGCCCGCCTACAGAAATAGATAGGGAGCAAAGCCACAAAAAGATTGTTATAAAGCGTACAAAGGAAGTTATTGATCTGGAACTGGACAGTCCTGGTGGAAACACTGGACTTCAACACAGAAAAACTAAAAGAATTGTTGAATTGTCAAATTTTGAGAAACAAAAGAAACAGGAGACTGTGTATGGAACTGAAGGTTTTAAAAAATGGAACAGTAAAGAGGACAGAAGATGGCGGGAAGAGCAAGAGAAATGGAGAAATGATGCAAGGCTTCGAGAAGAAGACAGAGCAAGAAGGCATCACAAAGAAGAAATCAGGATGCTCAAAGAGCAAGAAAGGTTAGACGAGATAAAAAGATTTGAAGAAGATATTAGAAGAGAAAGGGAGGAGGAAGAGCGACAAAAAGCTAAGAAGAAAAAGAAGAAGAAGAAACCTGAGTTAAGAGATGAGTATTTAGATGACCCCAGAGCAAGAAGACATGATAAGAGAATGCCAGAAAGAGACCGAAGTGGAAAAAGGAGATCTGTTACTGAGTTAGGAAAGATTGGTGCAGATTATATGCCGCCAACAAAACGCCGAAGAGGGGGAGGGGGAGAGGTTGGTTTGGCAAATATCTTGGAGAGCGTTGTGGACACCATTGTGAAAGATAGGTATGATCTATCGTATCTTTTCTTGAAACCGGTGTCGAAGAAGGAGGCTCCCGACTACCTGGACGTTATAGAGAGGCCTATGGATCTTTCCAGAATCAGGGAGAGAGTACGGAATATGGAGTACAAGAGCCGAGAAGATTTCAGGCACGACATGTGGCAGATTACTTTTAATGCACATAAATATAACGACGGGCGAAATCCAGGAATTCCCCCGCTTGCAGATATGCTTTTGGAATATTGTGATTATTTGTTGAATGAGAATGATGATAGCCTCACTGAAGCAGAAGCTGGCATTGAAATTAGAGATTTCTAA | 5673 | 0.4077 | MGYDSDSPSQDGRDEDDEEEYEDSGKGNRFLGFMFGNVDNSGDLDVDYLDEDAKEHLSALADKLGPSLTDIDLSGKSPQTPPDVVEQDCDVKAEDAVDYEDIDEEYDGPETEAANEEDYLLPKKEFFSSEASVCLESKASVFDDENYDEESEKEQDFVNDDSKVYNIPLAGEQEESFVDASKEESSLEHELHVDSPQTEELDADVQKLEEDGPEVQKRSMAMPLPVLCVEDGVAILRFSEIFGIHEPLRKGEKREHRHSIPRDRYKSFDLTDDFVEEDEEEFLKGFSQSLSLSKQVCVVHNDVSESNDVDLEFPKFGFLHADASVDRKDDQQSKDSCHSAEPMKGDFVEDHFWKDHPFMLANFYPLDQQDWEDKILWGNSPVPSYNNVESCEISGPELGASGGSEIEIESGIHNIQMEPQKVLEDKNHNVLMRSSPVKLEPFGSRDSSGAKTNLISRSLFHPQLLRLESRSEVDSSSLADGRDAEISEHNQSGQVKRFTKVISQNRDMMEGSWLDKIIWEELDQPTVKPKLIFDLQDDQMHFEVLDTKDGTHLCLHAGAMILTHSLKLSSGDSSELPGHGSQYGWRYVANDKHYSNRKTSQQLKSNSKKRSAHGVKVFHSQPALKLQTMKLKLSNKDIANFHRPKALWYPHDNEVAVKEQGKLPTQGPMKIIIKSLGGKGSKLHVDVEETLSSVKAKASKKLDFKVSETVKTFYLGRELEDHKSLAAQNVQPNSLLHLVRTKIHLWPKAQRVPGENKSLRPPGAFKKKSDLSVKDGHVFLMEYCEERPLLLSNVGMGARLCTYYQKCSPDDQSGSLLRNTDSRLGHIISLDPADKFPFLGDLKPGCSQSSLETNMYRAPIFPHKVPLTDYLLVRSSKGKLSLRRIDKINVVGQQEPLMEVLSPGSKNLQTYMMNRLLVHMCREFQAAEKRHLPPYIGVDEFLSQFPYQSEASFRKKIKEYANLQRGTNGQSILVKKRNFRIWSEDELRKMVTPELVCAYESMQASLYRLKHLGITETHPTNISSAMSRLPDEAIALAAASHIERELQITPWNLSCNFVACTSQGKENIERMEITGVGDPSGRGMGFSYARAPPKAPVSSAMVKKKAAANRGGSTVTGTDADLRRLSMDAAREVLLKFNVPEEVIAKQTRWHRIAMIRKLSSEQATSGVKVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQVQSLSAVNGDENESDSEGNSDLDSFAGDLENLLDAEECEEGEEGTNDLKRDKGDGVKGLKMRRRPTLAQAEEEIEDEAAEAAELCRLLMDDYEADRKKKKKAKVMVGEARLVPKMQSKFSFDNAEQVKQITNTLQLDGTNHLKEDAITDLREEENVPAKKSKSLKVNKAKKNDIMPISIPNKKIKLNMGEGIKNQVFKEKKPSRETFVCGACGKAGHMRTNKNCPKYGEDLETQLESADMEKSSGKSSFVDPSSLSQHKAPSKKSMSKSATKVAPVDNSTKIPLKFKCSSTEKSSDKPAVETLQSSDKPVTSDSETAKSAKVNKIIIPKKVKPDDTLAESRKHAIVIRPPTDSGRGQVDSHKFPIKIRPPTEIDREQSHKKIVIKRTKEVIDLELDSPGGNTGLQHRKTKRIVELSNFEKQKKQETVYGTEGFKKWNSKEDRRWREEQEKWRNDARLREEDRARRHHKEEIRMLKEQERLDEIKRFEEDIRREREEEERQKAKKKKKKKKPELRDEYLDDPRARRHDKRMPERDRSGKRRSVTELGKIGADYMPPTKRRRGGGGEVGLANILESVVDTIVKDRYDLSYLFLKPVSKKEAPDYLDVIERPMDLSRIRERVRNMEYKSREDFRHDMWQITFNAHKYNDGRNPGIPPLADMLLEYCDYLLNENDDSLTEAEAGIEIRDF* | 1891 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1444 | 1480 | - | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 175 | 200 | - | - | |
Gso9g1776 | 1890 | SMART | ubq_7 | 669 | 741 | IPR000626 | GO:0005515 | |
Gso9g1776 | 1890 | CDD | Ubl_TAFs_like | 669 | 740 | - | - | |
Gso9g1776 | 1890 | PANTHER | BNAA01G26290D PROTEIN | 1398 | 1885 | - | - | |
Gso9g1776 | 1890 | PANTHER | BNAA01G26290D PROTEIN | 14 | 1298 | - | - | |
Gso9g1776 | 1890 | SMART | bromo_6 | 1765 | 1876 | IPR001487 | GO:0005515 | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1242 | 1268 | - | - | |
Gso9g1776 | 1890 | SUPERFAMILY | Bromodomain | 1757 | 1879 | IPR036427 | GO:0005515 | |
Gso9g1776 | 1890 | SUPERFAMILY | TAF(II)230 TBP-binding fragment | 23 | 62 | IPR036741 | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 176 | 200 | - | - | |
Gso9g1776 | 1890 | ProSitePatterns | Bromodomain signature. | 1791 | 1848 | IPR018359 | - | |
Gso9g1776 | 1890 | Gene3D | - | 1770 | 1884 | IPR036427 | GO:0005515 | |
Gso9g1776 | 1890 | SUPERFAMILY | Ubiquitin-like | 662 | 740 | IPR029071 | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1715 | 1748 | - | - | |
Gso9g1776 | 1890 | Coils | Coil | 1661 | 1714 | - | - | |
Gso9g1776 | 1890 | PANTHER | TRANSCRIPTION INITIATION FACTOR TFIID | 14 | 1298 | IPR040240 | GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025 | |
Gso9g1776 | 1890 | PANTHER | TRANSCRIPTION INITIATION FACTOR TFIID | 1398 | 1885 | IPR040240 | GO:0001091|GO:0004402|GO:0005669|GO:0006366|GO:0017025 | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1538 | 1552 | - | - | |
Gso9g1776 | 1890 | Gene3D | - | 651 | 741 | - | - | |
Gso9g1776 | 1890 | Gene3D | - | 22 | 68 | IPR036741 | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Gso9g1776 | 1890 | ProSiteProfiles | Ubiquitin domain profile. | 669 | 739 | IPR000626 | GO:0005515 | |
Gso9g1776 | 1890 | Pfam | TATA box-binding protein binding | 19 | 61 | IPR009067 | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1210 | 1229 | - | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 66 | 118 | - | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1563 | 1584 | - | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1695 | 1748 | - | - | |
Gso9g1776 | 1890 | Pfam | Ubiquitin family | 671 | 741 | IPR000626 | GO:0005515 | |
Gso9g1776 | 1890 | PRINTS | Bromodomain signature | 1789 | 1802 | IPR001487 | GO:0005515 | |
Gso9g1776 | 1890 | PRINTS | Bromodomain signature | 1803 | 1819 | IPR001487 | GO:0005515 | |
Gso9g1776 | 1890 | PRINTS | Bromodomain signature | 1819 | 1837 | IPR001487 | GO:0005515 | |
Gso9g1776 | 1890 | PRINTS | Bromodomain signature | 1837 | 1856 | IPR001487 | GO:0005515 | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1659 | 1680 | - | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1439 | 1525 | - | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1487 | 1523 | - | - | |
Gso9g1776 | 1890 | Pfam | Bromodomain | 1777 | 1852 | IPR001487 | GO:0005515 | |
Gso9g1776 | 1890 | Pfam | Protein of unknown function (DUF3591) | 589 | 1155 | IPR022591 | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1247 | 1268 | - | - | |
Gso9g1776 | 1890 | CDD | Bromodomain | 1775 | 1871 | - | - | |
Gso9g1776 | 1890 | Coils | Coil | 1271 | 1291 | - | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 93 | 114 | - | - | |
Gso9g1776 | 1890 | MobiDBLite | consensus disorder prediction | 1538 | 1584 | - | - | |
Gso9g1776 | 1890 | ProSiteProfiles | Bromodomain profile. | 1786 | 1856 | IPR001487 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Gso9g1776 | Gso-Chr9 | 42181442 | 42209155 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Gso9g1776 | 669 | 739 | Cytoplasmic Ribosomal Protein Gene Family | AT3G62250 | 38.028 | 8.98e-07 | 48.9 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Gso9g1776 | K03125 | - | gmx:100780733 | 3554.99 |