Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1773 ATGGGCGACAATGAAGGTCATGGTGATCTCTTATCAAACAACCTTGTCATCCTACTCATTGCCATGGGTTCCGCAGCTTTCGTTGTTTCAATGTACCATGTCATAGCTATTTGCTGGTGCAACCAGCGCATCACAAACCAAAACCAACAACAACAACAACGGCCATCACAAACGACGGAGGGTACTTCCTTGGCGTCGGTGGCGCACATGATTCCAACCCACAGGTATAGCAAGAAGAAAGTTGATAGTGTGGTTCAAGGCCGATCCAACTGTGATGGTGGAGACGATGGCGACACGTGTGCGGTGTGCTTGGGAGACTTTGAAGATGGTGAGGAGTTGAGGACGATGCCTGAGTGCATGCATTCTTTCCACGTGGCATGCATTGATATGTGGCTGAGTTCGCATTCGAGTTGCCCTATTTGCCGTAGCAGTGCCACACCTTCTCAAGAGGTGCTTCACTCCGACCATGATTTCAATTATGCATATCAGCATCAACACAGCTTAGATATGTCCACGCATCAGTTCGCTGTCACACATGTGATGCGACGATGA 552 0.4891 MGDNEGHGDLLSNNLVILLIAMGSAAFVVSMYHVIAICWCNQRITNQNQQQQQRPSQTTEGTSLASVAHMIPTHRYSKKKVDSVVQGRSNCDGGDDGDTCAVCLGDFEDGEELRTMPECMHSFHVACIDMWLSSHSSCPICRSSATPSQEVLHSDHDFNYAYQHQHSLDMSTHQFAVTHVMRR* 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1773 183 Pfam Ring finger domain 98 142 IPR001841 -
Gso9g1773 183 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 42 148 IPR013083 -
Gso9g1773 183 ProSiteProfiles Zinc finger RING-type profile. 100 142 IPR001841 -
Gso9g1773 183 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 2 183 IPR044675 -
Gso9g1773 183 PANTHER CHROMATIN REGULATOR PHD FAMILY-RELATED 2 183 - -
Gso9g1773 183 SUPERFAMILY RING/U-box 93 150 - -
Gso9g1773 183 SMART ring_2 100 141 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1773 Gso-Chr9 42156001 42157251 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1773 2 144 C3H Transcription Factor Family AT3G10910 34.266 4.05e-21 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1773 - - gmx:102660266 358.221