Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1766 ATGGAGTCCAGTGAGGATGGGAGCATGTCATATAGAGAGTTCCATGCGAATGGAAGCCGCATGGTTACATCAGAAGTTGAGGCCAAGCTTGATGAAGGAAATATTCAAGAGGCAGAAGATGCATTGCGAGAAGGGTTGTCGCTCAATTTTGAGGAAGCAAGAGCTCTTCTTGGAAAGTTGGAGTATCAGAGAGGTAATGTAGAAGGTGCTCTTCGTGTGTTTGATGGGATTGATCTCCAAGCTGCCATACAGAGATTGCAACCTTCCTTTTCTGAAAAAACACCAGTCAAGAAAGGTCGCACTCGCACTGAATCACCCTCCTCAGTCTCTCAGCATGCTGCTAGTTTGGTGCTTGAAGCCATCTACTTAAAATCGAAGTCTCTGCAAAAACTGGGGAAATTTACTGAGGCTGCTAATGATTGTAAACGTATTCTTGATGCCGTTGAGAAGATATTTTATCTAGGTGTTCCTGATATTCAAGTGGATAATAGATTGCAAGAAATAGTCAGCCATGCAGTTGAGCTCCTTCCAGAGCTTTGGAAACAAGCTGGTTGCTACGATGAGGCAATCTCTGCTTATAGGCGAGCCCTTCTTAGTCAATGGAACCTTGATAATGATTGCTGTGCAAGAATTCAGAAGTCATTTGTTATTTTTTTGCTATACAGTGGGGTGGAGACAAGTCCACCTAGTTTAGCAGTTCAGATTGATGGATCATATGTGCCTAAAAATAATCTTGAAGAGGCTATTCTGCTATTGATGAATTTTTTGAAAAATTTTTGCCTTGGCAAGATGAAATGGGATCCTTCAGTCATGGAACACCTGACTTTTGCACTTTCTATATGTAGTGGAACTACTGTTTTAGCAAAGCAACTTGAAGAATTGAATCCTGGAGTATACCATCGAATTGATTGTTGGAATACTTTAGCTTTATGTTATAGTGGAGCTGGACAAAATGACAGTGCTTTGAATCTGCTAAGGAAGTCTTTGCACAAACATGAACGACCAAATGACCTTACATCATTGTTGTTAGCAGCCAGGATCTGCAGTGAGGATCCCTATCTTGCTGCTGAGGGAGTGAACCATGCACAGAGGGCAATCAGTAATGCTCACGGCCCAAATGAGCATTTAAAAGGTGTTGCTCTTCGGATGTTGGGACTTTGTTTGGGAAAGCAAGCTAAGGTCGCTTCCTCTGACTTTGAGAGGTCTCGCCTTCAGTCCAAAGCTCTGGAGTCATTGGTGGCGGCAATTAGATTGGAGCCAAACAATTCTGATCTGATTTTTGAATTGGCTGTTCAGTATGCAGAGCACCGAAATTTGCCTGCTGCTTTGCGTTCCGCGAGGCATTTCTTTAACAAAACAGGTGGTTCTGTATCGAAAGCTTGGAGATTGCTTGCTCTAATTTTGTCTGCACAACAAAGATTTTCAGAAGCTGAAGTGGTGACAGATGCTGCTTTAGATCAAACTTCAAGATGGGAGCAGGGGCCACTGCTTAGGCTGAAAGCAAAGTTGAAGATCTCCCAATCACGACCCATGGATGCTATTGAAACTTATCAGTACCTTCTTGCATTGGTTCAAGCCCAGAAGAAATCCTTTGGGTCTCTCCAAATTAGTTCAAAGGTTGAGTATGATAAAGTAAATGAATTTGATATTTGGCATGGTCTGGCAAATTTATATGCTAGTCTTTCTCATTGGAAGGATGCTGAAATCTGTTTGCAAAAGGCCAGGGAGTTGAAGGAATACTCTGCAGCATTGATGCACACTGAAGGTGTTTTGTTTGAAGGACGTGGGCAAAATGAAGAAGCTCTTTGTGCTACTATTAATGCTATACTACTCGAACCAAACTATGTTCCATGCAAGATCTTGATGGGTGCTTTGTTTCAAAAATTGGGTACAAAGCATTTGGCTATTGCAAGAAGCTTACTGTCTGATGCACTCCGAATAGAACCCACAAACCGCAAGGCTTGGTATAACTTGGGATTGCTTCACAAACATGAGGGCCGAATAAGTGATGCTGCCGACTGCTTCCAAGCAGCTTCCATGCTCGAAGAATCTGATCCCATCGAAAGTTTTAGCTCTTTACCTTGA 2085 0.4249 MESSEDGSMSYREFHANGSRMVTSEVEAKLDEGNIQEAEDALREGLSLNFEEARALLGKLEYQRGNVEGALRVFDGIDLQAAIQRLQPSFSEKTPVKKGRTRTESPSSVSQHAASLVLEAIYLKSKSLQKLGKFTEAANDCKRILDAVEKIFYLGVPDIQVDNRLQEIVSHAVELLPELWKQAGCYDEAISAYRRALLSQWNLDNDCCARIQKSFVIFLLYSGVETSPPSLAVQIDGSYVPKNNLEEAILLLMNFLKNFCLGKMKWDPSVMEHLTFALSICSGTTVLAKQLEELNPGVYHRIDCWNTLALCYSGAGQNDSALNLLRKSLHKHERPNDLTSLLLAARICSEDPYLAAEGVNHAQRAISNAHGPNEHLKGVALRMLGLCLGKQAKVASSDFERSRLQSKALESLVAAIRLEPNNSDLIFELAVQYAEHRNLPAALRSARHFFNKTGGSVSKAWRLLALILSAQQRFSEAEVVTDAALDQTSRWEQGPLLRLKAKLKISQSRPMDAIETYQYLLALVQAQKKSFGSLQISSKVEYDKVNEFDIWHGLANLYASLSHWKDAEICLQKARELKEYSAALMHTEGVLFEGRGQNEEALCATINAILLEPNYVPCKILMGALFQKLGTKHLAIARSLLSDALRIEPTNRKAWYNLGLLHKHEGRISDAADCFQAASMLEESDPIESFSSLP* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1766 694 Gene3D Tetratricopeptide repeat domain 23 221 IPR011990 GO:0005515
Gso9g1766 694 Gene3D Tetratricopeptide repeat domain 229 534 IPR011990 GO:0005515
Gso9g1766 694 Gene3D Tetratricopeptide repeat domain 535 689 IPR011990 GO:0005515
Gso9g1766 694 ProSiteProfiles TPR repeat profile. 652 685 IPR019734 GO:0005515
Gso9g1766 694 PANTHER PROTEIN NPG1 1 693 IPR043376 -
Gso9g1766 694 PANTHER CALMODULIN-BINDING PROTEIN 1 693 - -
Gso9g1766 694 SUPERFAMILY TPR-like 49 198 IPR011990 GO:0005515
Gso9g1766 694 SUPERFAMILY TPR-like 403 678 IPR011990 GO:0005515
Gso9g1766 694 SMART tpr_5 548 581 IPR019734 GO:0005515
Gso9g1766 694 SMART tpr_5 302 335 IPR019734 GO:0005515
Gso9g1766 694 SMART tpr_5 118 151 IPR019734 GO:0005515
Gso9g1766 694 SMART tpr_5 458 491 IPR019734 GO:0005515
Gso9g1766 694 SMART tpr_5 582 615 IPR019734 GO:0005515
Gso9g1766 694 SMART tpr_5 652 685 IPR019734 GO:0005515
Gso9g1766 694 SUPERFAMILY TPR-like 118 443 IPR011990 GO:0005515
Gso9g1766 694 Pfam Tetratricopeptide repeat 653 684 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1766 Gso-Chr9 42118767 42126116 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1766 12 693 Calmodulin-binding Proteins AT2G43040 72.303 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1766 K21843 - gmx:100814609 1361.67