Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1758 ATGGAGAGGTACAAGTTAATTAAGGAAATTGGTGATGGGACGTTTGGGACTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCTATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCATTACGAAAAATGAATCACCCAAATATTGTGAAGCTGAAAGAAGTTATTCGAGAAAGTGATATCTTGTACTTTGTTTTTGAGTACATGGAATGCAACCTATACCAACTCATGAAAGACAGGGAAAAACTGTTTTCTGAAGCTGAAGTTAGAAATTGGTGTTTTCAAGTTTTTCAAGGTCTTGCTTACATGCACCAGCGTGGATACTTCCATCGTGACCTGAAGCCTGAAAACTTGCTGGTTACCAAGGATTTCATCAAAATCGCTGATTTTGGACTAGCCCGAGAAATCAGTTCACAACCACCCTACACTGAGTATGTCTCCACACGATGGTATCGTGCTCCTGAAGTGCTGCTTCAGTCTTATATGTATACCTCTAAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAGCTTTTCTCTCTTCGTCCTCTTTTCCCAGGTGCCAGTGAAGCGGATGAGATTTACAAAATATGTGGTGTGATAGGCAATCCAACCTTTGAATCATGGGCGGATGGACTCAAACTTGCAAGGCATATTAACTACCAGTTTCCACAGCTTGCCGGTGTGCATCTTTCTGCTTTGATTCCGTCTGCTAGTGATGATGCAATCAGCCTTATTACATCACTTTGCTCCTGGGATCCCTGCAAGAGGCCAACAGCTTCAGAGGCTCTTCAACATCCTTTCTTCCAGAGTTGCTTTTACATTCCTCCATCCCTTCGCAACAGAGCAGTAGCAAGAACTCCTCCACCTGCTGGAACCAGAGGAGCACTGGATCAGCAAGAGGTCAAGAGATATTCCGGTGTGCAACGGAAGCTTGATATGGTAAATCAGGATGGAATTAAGAACGAAAAGCCAGTGAGGACTACTAAACCAAAATATCGACAGCCAGGAAAGGACAGCAGCCCAACTTCTATGAGCAAAGGGAGGTCTGTACGTGGGGTTTCAGAAACAGCTGAAAAGTTGCGCAATTTGTCAGTTACCAGTCGAAGACAATCATCAATAGGAATAGGGCAACCCCGTCCTCCTCCACCAATGAAGGCTGGAGGGAATTGGATTTCTGAATCTGGAAACTTCATCCTTGGGCCCCCACAGCAGATTTCGACTGGAAGAACTTTCGCAAGAAAAGTTGCCGGATGA 1299 0.4403 MERYKLIKEIGDGTFGTVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRESDILYFVFEYMECNLYQLMKDREKLFSEAEVRNWCFQVFQGLAYMHQRGYFHRDLKPENLLVTKDFIKIADFGLAREISSQPPYTEYVSTRWYRAPEVLLQSYMYTSKVDMWAMGAIMAELFSLRPLFPGASEADEIYKICGVIGNPTFESWADGLKLARHINYQFPQLAGVHLSALIPSASDDAISLITSLCSWDPCKRPTASEALQHPFFQSCFYIPPSLRNRAVARTPPPAGTRGALDQQEVKRYSGVQRKLDMVNQDGIKNEKPVRTTKPKYRQPGKDSSPTSMSKGRSVRGVSETAEKLRNLSVTSRRQSSIGIGQPRPPPPMKAGGNWISESGNFILGPPQQISTGRTFARKVAG* 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1758 432 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Gso9g1758 432 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1758 432 MobiDBLite consensus disorder prediction 321 432 - -
Gso9g1758 432 CDD STKc_MAK_like 4 283 - -
Gso9g1758 432 MobiDBLite consensus disorder prediction 411 425 - -
Gso9g1758 432 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Gso9g1758 432 MobiDBLite consensus disorder prediction 374 389 - -
Gso9g1758 432 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1758 432 Gene3D Transferase(Phosphotransferase) domain 1 83 288 - -
Gso9g1758 432 PANTHER CYCLIN-DEPENDENT KINASE F-4-LIKE ISOFORM X1 1 330 - -
Gso9g1758 432 MobiDBLite consensus disorder prediction 349 365 - -
Gso9g1758 432 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Gso9g1758 432 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Gso9g1758 432 Gene3D Phosphorylase Kinase; domain 1 1 82 - -
Gso9g1758 432 MobiDBLite consensus disorder prediction 330 348 - -
Gso9g1758 432 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 330 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1758 Gso-Chr9 42040538 42047084 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1758 1 286 Core Cell Cycle Gene Families AT1G66750 37.801 8.79e-67 215
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Gso9g1758 Pkinase 4.6e-77 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1758 K08829 - gmx:100810838 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1272 1 49125159 49131998 Gso9g1758 9 42040538 42047084 GST