Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1757 ATGTTTACATGCATTGCGTGTACGAAGCAAGCGGCGGAGGAGAAGGAAGAAGAAGAAGAGGGTGAGAGTGGCACAACGAGTACAAATAAAGAAGCCGTCAAAAGCCTGAGTGCTCAGTTAAAGGATATGGCACTGAAGTTTTCAGGTGCCTACAAGCAGTGCAAACCTTGCACAGGGTCTAGTACCTACAAGAATGGACAGAGGTCATATCCTGACTTTGACACCATTTCAGAAGGGGTTCCATACCCTTATATTGGAGGTGCAAGCTCAACTTCAACCCCTGCTTGGGACTTCACAAGCTCCAATTTCCCTGGTGGTAGATCAGACCAAAGATTTATGGGGAGATTCAGTGGTGATAGGACCCCTAGAGGGCCTCAATCAGCACCAGCCTCTGATGTAGTAGTTGTTGAGGATGAGGATGAAACCAAGGAGTGGATGGCACAGGTGGAACCAGGGGTTCACATTACCTTTGTGTCTCTTCCTAATGGGGGAAATGATCTCAAAAGAATTCGCTTCAGCCGAGAGATTTTCGACAAGTGGCAAGCTCAAAAATGGTGGGGTGAGAATTATGACAGAATCATGGAACTTTACAACGTGCAGAGATTCAATCGACAAGCTCTCAACACTCCTTCAAGATCTGAGGATGAGCGAAGAGATTCTTCTTACTCAAGAATGACATCTGGACAAGATAGCCCCATGCACTCCATGTCTTTAAAGGGTTGGACACCAAGGAATCACTATAAACCCTCAGGGAATAACCCTTCTGAAGCTATGGAACAAGGCAGTGGTGGTGGCCAAGACTTCCATGCAGCAGCTTCTTCCGTGGAAGCATCAAGGACAACCACCTCTTCTAGAGACGAGCGTTCAATGAGCAATGCCAGTGACTTGGAGACTGAATGGATAGAGCAAGATGAACCTGGAGTCTACATCACAATCAGGCAATTAGCTGATGGAACAAAGGAGCTTCGCCGTGTCAGATTCAGCCGGGAGAGATTTGGGGAGGGACATGCAAAGAAATGGTGGGAAGACAACAGAGAAAGAATACAAGCTCAATATCTTTGA 1062 0.468 MFTCIACTKQAAEEKEEEEEGESGTTSTNKEAVKSLSAQLKDMALKFSGAYKQCKPCTGSSTYKNGQRSYPDFDTISEGVPYPYIGGASSTSTPAWDFTSSNFPGGRSDQRFMGRFSGDRTPRGPQSAPASDVVVVEDEDETKEWMAQVEPGVHITFVSLPNGGNDLKRIRFSREIFDKWQAQKWWGENYDRIMELYNVQRFNRQALNTPSRSEDERRDSSYSRMTSGQDSPMHSMSLKGWTPRNHYKPSGNNPSEAMEQGSGGGQDFHAAASSVEASRTTTSSRDERSMSNASDLETEWIEQDEPGVYITIRQLADGTKELRRVRFSRERFGEGHAKKWWEDNRERIQAQYL* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1757 353 Pfam Transcription factor BRX N-terminal domain 22 57 IPR027988 -
Gso9g1757 353 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 353 IPR044532 -
Gso9g1757 353 Pfam Transcription factor regulating root and shoot growth via Pin3 143 197 IPR013591 -
Gso9g1757 353 Pfam Transcription factor regulating root and shoot growth via Pin3 297 352 IPR013591 -
Gso9g1757 353 MobiDBLite consensus disorder prediction 224 238 - -
Gso9g1757 353 MobiDBLite consensus disorder prediction 207 299 - -
Gso9g1757 353 MobiDBLite consensus disorder prediction 246 260 - -
Gso9g1757 353 ProSiteProfiles BRX domain profile. 143 198 IPR013591 -
Gso9g1757 353 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 353 - -
Gso9g1757 353 MobiDBLite consensus disorder prediction 10 34 - -
Gso9g1757 353 ProSiteProfiles BRX domain profile. 298 353 IPR013591 -
Gso9g1757 353 MobiDBLite consensus disorder prediction 273 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1757 Gso-Chr9 42031975 42038846 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1757 1 353 Major Intrinsic Protein MIP AT1G31880 63.788 1.45e-156 442
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1757 - - gmx:100809782 680.248
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g1271 1 49115769 49123059 Gso9g1757 9 42031975 42038846 GST