Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1743 ATGGCAGCCTGCACTGTCTACTCAACACAATCTCTGAGCACAAATTGCTCCATCTCAACCCCATCAAAGACACAGCTGAGTTTCTTCCACCAAAAGCAGGTAGTTTTCTGGAGGAACAGCAACAGGGGCAACAGCAGCAGCAGAAGAAGCTATGTGATAACATGTGCAGCAGGTGACTCACAGACAGTGGTGATTGGTCTTGCTGCAGACTCAGGGTGTGGGAAGAGCACCTTCATGAGGAGGCTGACAAGTGTGTTTGGAGGAGCAGCAGAGCCACCGAAGGGTGGCAACCCTGACTCAAACACACTCATCAGTGACACCACCACTGTCATATGCTTGGATGATTACCACTCTTTGGATAGAACTGGCAGAAAGGAGAAGGGTGTCACTGCCCTTGACCCTAGAGCCAATGATTTTGATCTCATGTATGAACAAGTTAAAGCTCTTAAGGATGGAATTGCTGTTGAAAAACCAATCTACAACCATGTCACTGGTCTCCTGGATCCCCCTGAGCTCATTAAACCCCCCAAAATCTTAGTCATTGAAGGCTTGCACCCAATGTATGATTCTCGGGTCAGAGATCTCTTGGACTTTAGCATCTACCTAGACATTAGCAATGAGGTCAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGACACAGTCTTGAAAGCATCAAGGCTAGCATTGAAGCAAGGAAGCCTGATTTTGAAGCATATATTGATCCACAAAAGCAATACGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTCATTCCAGATGACAACGAGGGTAAGATTTTGAGAGTGAGGTTGATACAGAAAGAAGGGGTTAAGTACTTTAGCCCAGTTTACTTATTTGATGATGGCTCTACCATTTCATGGATACCATGTGGAAGGAAGCTTACATGCTCCTACCCTGGCATCAAATTCTTCTATGGACCAGAGACTTACTACGGAAATGAGGTGTCACTTGTAGAAATGGATGGACAATTTGACAGACTAGATGAACTAATATACGTTGAGAGCCACCTAAGCAACCTCTCTACAAAGTTCTATGGAGAGGTTACTCAACAGATGTTGAAGCATGCTGATTTCCCCGGCAGCAACAATGGAACAGGTCTCTTCCAAACCATAGTTGGTTTGAAGATAAGAGATTTATATGAGCAGCTAATAGCCACCAAGGCTGAGACTCCAGTGGCTGCAAAAGCTTAG 1224 0.4526 MAACTVYSTQSLSTNCSISTPSKTQLSFFHQKQVVFWRNSNRGNSSSRRSYVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGAAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKALKDGIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMYDSRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFEAYIDPQKQYADAVIEVLPTQLIPDDNEGKILRVRLIQKEGVKYFSPVYLFDDGSTISWIPCGRKLTCSYPGIKFFYGPETYYGNEVSLVEMDGQFDRLDELIYVESHLSNLSTKFYGEVTQQMLKHADFPGSNNGTGLFQTIVGLKIRDLYEQLIATKAETPVAAKA* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1743 407 PRINTS Phosphoribulokinase family signature 69 86 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gso9g1743 407 PRINTS Phosphoribulokinase family signature 178 196 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gso9g1743 407 PRINTS Phosphoribulokinase family signature 213 230 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gso9g1743 407 PRINTS Phosphoribulokinase family signature 231 254 IPR006082 GO:0005524|GO:0005975|GO:0008974
Gso9g1743 407 PANTHER PHOSPHORIBULOKINASE 6 406 - -
Gso9g1743 407 PANTHER URIDINE KINASE 6 406 - -
Gso9g1743 407 Pfam Phosphoribulokinase / Uridine kinase family 64 262 IPR006083 GO:0005524|GO:0016301
Gso9g1743 407 CDD PRK 64 353 - -
Gso9g1743 407 Gene3D - 59 294 IPR027417 -
Gso9g1743 407 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 332 IPR027417 -
Gso9g1743 407 ProSitePatterns Phosphoribulokinase signature. 213 226 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1743 Gso-Chr9 41878464 41882649 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1743 116 290 PRT Gene Family AT3G27440 26.404 1.14e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1743 K00855 - gmx:100807126 811.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0090 1 1019551 1023939 Gso9g1743 9 41878464 41882649 GST