Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1740 ATGGCAGATAGTTCAGTATCCTTTTTATTGGACAAGCTGAGTTCGTTACTTGAAGCAGAAGTGAAACTACAGAGAGGGGTCCGTGAAGATGTTCAGCACATCAAATATGAGCTGGAAGGCTACAAGGGCATCTTGAGGGTGGCTGATGCTCTGGAAGACAAAAACCCTGAACTCAAAGCATGGGTTAAACGAGTAAGAGATGTTGCTCATGACATGGAAGATGCTATAGATGAATTCAGCCTTGGCCTTGTTGATCAACATGGACAAGGCAACAATTCTTCGTTTCATATGAACTTTTTCACCCGGCATAAGATTGCTTCAAATATACAAGGTATCAAATCCAGATTGGACATTATATCCCAGAAACGTCCAGACATACCTTGGATAGGCTCAGGCTCAAGTCAACGATTGTCATCAAGGCTTGATAGCCAAGGTGATGCACTTCTGCTAGAAGAAGCTGATCTTGTTGGTATTGACAAACCCAAAAAGCAGCTTAGTGACTTGCTTTTCAATGAAGAAGCAGGTAGGGCTGTGATTCCCGTTTATGGGATGGGGGGGTTGGGGAAAACCACCTTGGCTAAACAAGTCTATGATGATCCAAAAGTGAAGAAGCGTTTCAGGATTCATGCTTGGATCAATGTTTCTCAGTCTTTTAAACTAGATGAGCTCCTGAAAGACCTGGTTCAACAGCTCCACACTGTCATAGGCAAACCAGCTCCGGAAGCAGTTGGACAAATGAAGAGTGACCAGCTCAAAGAGGTGATCAAGAACCTGCTTCAGCGAAGCCGGTACCTGGTTGTGCTGGATGATGTGTGGCAAGTAAAGGTATGGGATTCTGTCAAACTTGCTTTGCCTAATAACAACCGTGGCAGTAGAGTGATGCTTACCACACGCAAGAAAGATATAGCTTTGCATTCCTGTGCTGAATTGGGTAAGGATTTTGACCTCGAATTCTTACCCGAGGAAGAAGCTTGGTATCTTTTCTGCAAGAAAACATTTCAGGGTAACTCGTGCCCTCCTCATCTGGAGGAAGTTTGCAGGAAAATCTTGAAAATGTGTGGGGGGTTGCCACTAGCAATTGTAGGAATTGGTGGTGCATTGGCTACAAAAGGCAGGGCCAACATAGAAGAGTGGCAGATGGTTTGCAGAAGTTTAGGGTCTGAAATTGAAGGCAATGACAAACTGGAGGATATGAAGAAAGTGCTTTCCCTCAGTTTCAATGAGTTGCCTTATTATCTTAAGTCTTGTTTGTTGTACCTAAGCATCTTTCCCGAGTTTCATGCTATTGAGCACATGCGATTGATTCGTTTGTGGATAGCTGAAGGGTTTGTGAATGGAGAAGAAGGAAAGACACTGGAGGAAGTTGCAGACAGTTACCTCAAGGAGCTCTTGGACAGAAGTCTGCTGCAAGTGGTAGCAAAAACCAGTGATGGCAGGATGAAGACTTGTCGAATGCATGATCTTCTAAGGGAGATTGTCAATTTCAAGTCAAAGGATCAGAACTTTGCAACAATAGCCAAAGACCAAGATATAACCTGGCCAGACAAAGTTCGACGCCTATCAATCATAAACACATTGAATAATGTGCAACAAAATAGGACTGCATTCCAACTTCGGTCTCTGCTAATGTTTGCCTTATCAGATAATTCACTCGAGAATTTTTCTATACGTGCATTATGTTCCACTGGTTATAAGTTACTCAGGGTGTTAGACTTGCAAGATGCGCCTTTGGAGGTTTTTCCTGCTGAAATTGTCAGTCTATACCTTCTCAAGTATCTGAGTTTGAAGAATACAAAGGTGAAAAGCATTCCAGGTTCCATTAAGAAGCTGCAGCAGTTGGAGACATTAGATCTTAAACACACTCATGTCACTGTATTGCCAGTTGAAATTGTGGAGCTCCAACGATTACGCCATCTCTTGGTGTATCGCTATGAGATTGAATCCTATGCTAATTTACATTCAAGGCATGGCTTCAAGGTGGCTGCCCCTATAGGACTTATGCAATCTTTGCAAAAGCTATGTTTTATAGAGGCAGATCAGGCTTTGATGATTGAGCTAGGAAAACTCACTCGACTCAGGAGGCTTGGCATCAGAAAGATGAGGAAACAAGATGGTGCTGCTTTGTGTTCATCCATTGAGAAGATGATCAATCTCCGCTCATTGTCCATAACTGCAATTGAAGAAGATGAGATAATTGACATTCACAACATCTTCAGGCCTCCTCAGTATCTCCACCAGTTATACTTGTCTGGGCGCCTAGACAATTTTCCTCACTGGATAAGTTCTCTAAAGAATTTGGTCCGAGTGTTTCTAAAATGGAGCCGGTTAAAAGAGGATCCTCTGGTTCATCTTCAAGATTTGCCAAATCTAAGACATGTCGAGTTTCTTCAAGTTTATGTTGGCGAGACATTGCACTTCAAGGCTAAGGGGTTTCCTAGTCTGAAGGTGTTAGGACTTGATTATTTAGATGGACTGAAATCTATGACTGTGGAGGAGGGAGCAATGCCTGGTCTTAAAAAGCTCATCATCCAGCGCTGTGATTCATTGAAGCAGGTACCATTAGGCATTGAGCACCTAACAAAACTAAAATCAATAGAGCTTTTTGATATGCCTGAAGAATTTATTACAGCACTGCGTCCAAATGGAGGTGAGGATTATTGGAGAGTGCAACAAGTTCCAGCAGTTTATATCTCCTATTGGAGGGATAGGGGTTGGGATGTCTACTCATTAGAGACATTAGGAGAGAGAGAGAGTGATTCCAGTGGGGGTACTGCAATCAGAAGTCTTGAAATTTGTACGCTCTGGAAGGTTTAA 2814 0.4275 MADSSVSFLLDKLSSLLEAEVKLQRGVREDVQHIKYELEGYKGILRVADALEDKNPELKAWVKRVRDVAHDMEDAIDEFSLGLVDQHGQGNNSSFHMNFFTRHKIASNIQGIKSRLDIISQKRPDIPWIGSGSSQRLSSRLDSQGDALLLEEADLVGIDKPKKQLSDLLFNEEAGRAVIPVYGMGGLGKTTLAKQVYDDPKVKKRFRIHAWINVSQSFKLDELLKDLVQQLHTVIGKPAPEAVGQMKSDQLKEVIKNLLQRSRYLVVLDDVWQVKVWDSVKLALPNNNRGSRVMLTTRKKDIALHSCAELGKDFDLEFLPEEEAWYLFCKKTFQGNSCPPHLEEVCRKILKMCGGLPLAIVGIGGALATKGRANIEEWQMVCRSLGSEIEGNDKLEDMKKVLSLSFNELPYYLKSCLLYLSIFPEFHAIEHMRLIRLWIAEGFVNGEEGKTLEEVADSYLKELLDRSLLQVVAKTSDGRMKTCRMHDLLREIVNFKSKDQNFATIAKDQDITWPDKVRRLSIINTLNNVQQNRTAFQLRSLLMFALSDNSLENFSIRALCSTGYKLLRVLDLQDAPLEVFPAEIVSLYLLKYLSLKNTKVKSIPGSIKKLQQLETLDLKHTHVTVLPVEIVELQRLRHLLVYRYEIESYANLHSRHGFKVAAPIGLMQSLQKLCFIEADQALMIELGKLTRLRRLGIRKMRKQDGAALCSSIEKMINLRSLSITAIEEDEIIDIHNIFRPPQYLHQLYLSGRLDNFPHWISSLKNLVRVFLKWSRLKEDPLVHLQDLPNLRHVEFLQVYVGETLHFKAKGFPSLKVLGLDYLDGLKSMTVEEGAMPGLKKLIIQRCDSLKQVPLGIEHLTKLKSIELFDMPEEFITALRPNGGEDYWRVQQVPAVYISYWRDRGWDVYSLETLGERESDSSGGTAIRSLEICTLWKV* 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1740 937 Gene3D - 406 496 IPR036388 -
Gso9g1740 937 Gene3D Ribonuclease Inhibitor 679 878 IPR032675 -
Gso9g1740 937 Gene3D Ribonuclease Inhibitor 524 677 IPR032675 -
Gso9g1740 937 Pfam Rx N-terminal domain 6 95 IPR041118 -
Gso9g1740 937 SUPERFAMILY L domain-like 484 874 - -
Gso9g1740 937 Pfam NB-ARC domain 160 407 IPR002182 GO:0043531
Gso9g1740 937 PANTHER DISEASE RESISTANCE PROTEIN RP 149 898 IPR044974 GO:0006952
Gso9g1740 937 PANTHER DISEASE RESISTANCE PROTEIN RP 1 134 IPR044974 GO:0006952
Gso9g1740 937 PRINTS Disease resistance protein signature 178 193 - -
Gso9g1740 937 PRINTS Disease resistance protein signature 258 272 - -
Gso9g1740 937 PRINTS Disease resistance protein signature 353 367 - -
Gso9g1740 937 PRINTS Disease resistance protein signature 608 624 - -
Gso9g1740 937 Gene3D - 5 118 - -
Gso9g1740 937 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 420 IPR027417 -
Gso9g1740 937 Gene3D - 318 405 IPR042197 -
Gso9g1740 937 PANTHER OS08G0539900 PROTEIN 149 898 - -
Gso9g1740 937 PANTHER OS08G0539900 PROTEIN 1 134 - -
Gso9g1740 937 Gene3D - 144 309 IPR027417 -
Gso9g1740 937 CDD RX-CC_like 2 120 IPR038005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1740 Gso-Chr9 41851841 41854973 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1740 178 636 WRKY Transcription Factor Family AT5G45050 21.130 1.34e-08 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1740 K13457 - gmx:100805529 1831.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0093 1 1045009 1048378 Gso9g1740 9 41851841 41854973 GST