Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1725 ATGGGAAGCAGTGAGATGGATAAAACTACAAAAGAGAAGGAGTCAAAGACGCCGCCACCACCTACATCACAGGAGCAGTCTTCGACCACCGGCACTGGAACAATTAATCCTGAGTGGCCTGGCTTTCAGGCATATTCTCCTATACCTCCACATGGTTTCTTGGCATCAAGTCCCCAGGCTCACCCTTATATGTGGGGTGTCCAGCAATTTATGCCTCCCTATGGTACTCCACCACATCCCTATGTTGCAATGTATCCCCCTGGTGGCATTTATGCTCATCCATCCATGCCTCCGGGATCTTATCCTTTTAATCCTTTTGCCATGCCTTCTCCTAATGGCATTGCTGAGGCTTCAGGAAACACTCCTGGCAGCATGGAAGCTGATGGCAAGCCTTCTGAGGTGAAGGAAAAATTGCCAATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATCACAGGGAAAAATAATGAACATGGTAAAACACTGGGGACATCTGCTAATGGAATTCATTCAAAGAGTGGTGAGAGTGCTAGTGAAGGTGAAGGTACCAGTGAAGGAAGTGATGCAAATTCTCAGAATGACTCTCAATTAAAATCAGGGGGCCGGCAGGATTCTTTTGAAGATGAACCCTCTCAAAATGGCAGTTCAGCATATACTCCTCAAAATGGGGGACTAAATATACCTCATACAGTGGTCAATCAAACCATGTCTATCATACCTATCTCTGCAGGTGGTGCTCCTGGAGCTGTTCCTGGTCCCACGACAAACTTAAATATAGGAATGGATTATTGGGGTACACCAGGTTCATCCAACATTCCTGGACTTGGCAGAAAGGTTCCATCTACTGCAGTTGCTGGAGGGATGGTTACTGTTGGATCACGGGATAGTGCTCAGTCACAACTCTGGCTACAGGATGAAAGAGAGCTTAAAAGGCAAAGGCGGAAGCAGTCTAACAGGGAATCTGCTCGCAGGTCCAGGTTGCGCAAGCAGGCCGAGTGTGATGAGTTAGCTCAGCGTGCTGAGGCTTTGAAGGAAGAAAATGCTTCTCTCCGGTCAGAAGTAAATCGAATCAGGAGTGATTATGAGCAGCTACTCTCCGAGAATGCAGCTCTCAAGGAGAGACTTGGGGAACTACCTCCGAATGATGATCATCATCATAGGTCTGGCAGGAATGATCAGCATGTGGGTAATGACACTCAACAGAGTGGGCAGACAGAGGCCGTGCAGGGTGGTCATTAG 1245 0.4731 MGSSEMDKTTKEKESKTPPPPTSQEQSSTTGTGTINPEWPGFQAYSPIPPHGFLASSPQAHPYMWGVQQFMPPYGTPPHPYVAMYPPGGIYAHPSMPPGSYPFNPFAMPSPNGIAEASGNTPGSMEADGKPSEVKEKLPIKRSKGSLGSLNMITGKNNEHGKTLGTSANGIHSKSGESASEGEGTSEGSDANSQNDSQLKSGGRQDSFEDEPSQNGSSAYTPQNGGLNIPHTVVNQTMSIIPISAGGAPGAVPGPTTNLNIGMDYWGTPGSSNIPGLGRKVPSTAVAGGMVTVGSRDSAQSQLWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALKEENASLRSEVNRIRSDYEQLLSENAALKERLGELPPNDDHHHRSGRNDQHVGNDTQQSGQTEAVQGGH* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1725 414 Coils Coil 328 376 - -
Gso9g1725 414 CDD bZIP_plant_GBF1 313 363 IPR045314 GO:0003700|GO:0006355
Gso9g1725 414 MobiDBLite consensus disorder prediction 1 15 - -
Gso9g1725 414 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 414 IPR044827 GO:0003700|GO:0006355|GO:0043565
Gso9g1725 414 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
Gso9g1725 414 Pfam Disordered region downstream of MFMR 136 275 - -
Gso9g1725 414 MobiDBLite consensus disorder prediction 396 414 - -
Gso9g1725 414 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Gso9g1725 414 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Gso9g1725 414 Gene3D - 311 364 - -
Gso9g1725 414 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 373 IPR004827 GO:0003700|GO:0006355
Gso9g1725 414 MobiDBLite consensus disorder prediction 115 230 - -
Gso9g1725 414 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 414 - -
Gso9g1725 414 MobiDBLite consensus disorder prediction 1 46 - -
Gso9g1725 414 MobiDBLite consensus disorder prediction 147 230 - -
Gso9g1725 414 MobiDBLite consensus disorder prediction 310 333 - -
Gso9g1725 414 MobiDBLite consensus disorder prediction 378 395 - -
Gso9g1725 414 MobiDBLite consensus disorder prediction 370 414 - -
Gso9g1725 414 MobiDBLite consensus disorder prediction 16 39 - -
Gso9g1725 414 SUPERFAMILY Leucine zipper domain 311 367 IPR046347 GO:0003700|GO:0006355
Gso9g1725 414 Pfam bZIP transcription factor 308 370 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1725 Gso-Chr9 41685629 41694519 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1725 1 408 bZIP Transcription Factor Family AT2G35530 62.802 4.20e-167 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Gso9g1725 MFMR_assoc 1.6e-59 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1725 K09060 - gmx:778122 781.171
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0121 1 1338202 1348488 Gso9g1725 9 41685629 41694519 GST