Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Gso9g1715 ATGGTGGAAAGAAGAGTGACTTTATCAAAGGAAGTTAGAAATGGGTTAGAATTTTTGAAGCGTAAAAGGCTTCAGCGTGCAAAATCTGTCACTGCCACCCAGACAAGTGTTGCTAGCATGATGAACAGAAGTGGAGGAGATGCTTTAAGAGCTTCAGCATCATGTGGCACAAGATTTCATGGTAATGCTGATGTCTTTTCCAAGCGCAAGGTGGATAAGTTTGATACAAATGACCTGGATTGGACTGATAAAATTCCAGAATGTCCTGTGTATTCTCCAACAAAGGAGGAATTTGAGGATCCTTTGATTTATTTGCAAAAGATTGCTCCAGAAGCTTCTAAATATGGTATATGCAAGATTATTTCCCCTTTGAGTGCTTCAGTACCTGCTGGGGTTGTTTTAATGAAGGAGAAAGCAGGATTCAAGTTTACAACTAGAGTGCAGCCCCTTCGCCTTGCTGAATGGGATACTGAAGACAAAGTCACATTTTTTATGAGTGGAAGAAATTATACATTTCGAGATTTTGAGAAAATGGCCAACAAGGTATTTGCACGAAGATATTGCAGTGCTGGATGTCTTCCTGCCACATACTTGGAAAAAGAGTTTTGGCATGAAATTGGTTGTGGAAAAATGGAAACTGTTGAATATGCATGTGATGTTGATGGCAGTGCCTTTTCATCATCTCCCACTGACCAGCTTGGTAACAGCAAATGGAATTTGAAGAAACTTTCGAGGTTGCCCAAATCGATTTTACGGCTCTTGGAAACATCAATTCCGGGAGTAACGGAACCCATGCTATACATTGGAATGCTGTTTAGTATCTTTGCTTGGCATGTGGAGGATCATTATTTGTACAGCATTAACTATCATCACTGCGGGGCATCAAAAACATGGTACGGTATTCCAGGTCATGCAGCTTTGGAATTTGAAAGGGTGGTGAGAGAACACGTGTACACTAATGATATTTTGTCAAGTGATGGGGAAGATGGAGCCTTTGATGTTCTCCTGGGGAAAACAACACTATTTCCACCAAATATTTTGTTGGAGCATGAAGTTCCTGTCTACAAGGCTGTTCAAAAGCCAGGGGAGTTTATAATAACATTCCCTAGGGCATATCACGCTGGCTTCAGTCATGGTTTCAACTGTGGAGAAGCAGTGAATTTTGCAATTGGTGATTGGTTTCCTTTAGGGGCTGTTGCTAGCAGAAGATATGCACTTCTTAACAGGGTTCCTTTACTGCCTCATGAAGAACTTCTATGCAAAGAAGCAATGCTTCTTCGTACATGCTTGGAACTTGAAGATTCTGATTTTCCTTCCTCTGACTTGTTTTCTCATAATAGCATTAAGATTTCATTTGTTAACTTGATGCGTTTCCAACATTGTGCTCGATGGTTCCTAACGAAATCAAGGGCGAGTATAAGGGTCTCTTTTCATTCCCATGCCACGATTCTCTGTAGTCTTTGCAAACGTGACTGTTACATAGCTTATGTTGACTGCAACTGTCACATGCATCCTGTATGCCTACGTCATGATGTTGATTTTCTTAACTTCAACTGTGGGAGCAAACACACACTTTATTTGAGGGAGGATATTATGGATATGGAAGCTGCAGCCAAGATGTTTGAGCACGAAGATGGGATATTGGATGAGATAAGGAAGCAAACTAAAAGTGACCAAAACATGTATGCATATCCTTTGTCAAATATGTTTCAGAGAGCTGAAGCGAATGGGTACACGCCTTATTGTGAGCTAAAACTTGATTCTGTTGTTGAATTCTATGCAACTCCAGAGCACTCAACAAATAATCAAGAATACAGTTCACAAAATCAATCTGTCATTGTACGTTGCTCTGAAAATAAAAAACCAGTGGTGTCTGAGGTTTCCTTTTCTTCTGCCACATCCACTCTTTGCTCTCTTTCAGAATCTCTCGAGAGCTTTTCTGCTCCCAAAAATCAGGCTGAGGAGCATATTAACAACAATGCAAGTATTATTGATTTTGAAGAGTTTGCTGAAAGAATATCCAACAGTGCATGTGAATCTTCATTATCTCCTGCTGTGTATCATGAAAGCTCGGTTAAACCACTGGGTGATCTTCAGAAGAGATTTGATACAAAATCCATTGTGGACGAGAGTGATGATTCTGATTCAGAGATATTTAGGGTAAAGCGTCCTTCTTCTCTGAAAGCAGAGAGGAGAAATATGAATGATGCCGTGCCTTCAAAACATACAGAGCAGCAGGGGCTAAAACGACTGAAGAAAATCCTTCCTGAAGGAAAGAGTGGGCAACCAATGGATTCTAGCAGAAGCAATGAATCAAGTTACAAATACAGTCACGCTGTTAACCATAAAGGTCATGCAGATATTTCATCCAGGGATAGATTTGCAAGGAGTAATGGTATTCCCATTTCTATAAGATATAAGAAGTTGGGCAACGAGGAAATAAGCATGCAAGGAGATCACCACCAAAGAGATAGGTTGCAACAGACATTTAGGGAACCACCTTCCATGGAGCTTGAGCCAAAGCGCCTTAAAGTCCGAGGCCCTTCATTTTTAGGCTTAGAGAGCAGATCGAATTGA 2577 0.4067 MVERRVTLSKEVRNGLEFLKRKRLQRAKSVTATQTSVASMMNRSGGDALRASASCGTRFHGNADVFSKRKVDKFDTNDLDWTDKIPECPVYSPTKEEFEDPLIYLQKIAPEASKYGICKIISPLSASVPAGVVLMKEKAGFKFTTRVQPLRLAEWDTEDKVTFFMSGRNYTFRDFEKMANKVFARRYCSAGCLPATYLEKEFWHEIGCGKMETVEYACDVDGSAFSSSPTDQLGNSKWNLKKLSRLPKSILRLLETSIPGVTEPMLYIGMLFSIFAWHVEDHYLYSINYHHCGASKTWYGIPGHAALEFERVVREHVYTNDILSSDGEDGAFDVLLGKTTLFPPNILLEHEVPVYKAVQKPGEFIITFPRAYHAGFSHGFNCGEAVNFAIGDWFPLGAVASRRYALLNRVPLLPHEELLCKEAMLLRTCLELEDSDFPSSDLFSHNSIKISFVNLMRFQHCARWFLTKSRASIRVSFHSHATILCSLCKRDCYIAYVDCNCHMHPVCLRHDVDFLNFNCGSKHTLYLREDIMDMEAAAKMFEHEDGILDEIRKQTKSDQNMYAYPLSNMFQRAEANGYTPYCELKLDSVVEFYATPEHSTNNQEYSSQNQSVIVRCSENKKPVVSEVSFSSATSTLCSLSESLESFSAPKNQAEEHINNNASIIDFEEFAERISNSACESSLSPAVYHESSVKPLGDLQKRFDTKSIVDESDDSDSEIFRVKRPSSLKAERRNMNDAVPSKHTEQQGLKRLKKILPEGKSGQPMDSSRSNESSYKYSHAVNHKGHADISSRDRFARSNGIPISIRYKKLGNEEISMQGDHHQRDRLQQTFREPPSMELEPKRLKVRGPSFLGLESRSN* 859
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Gso9g1715 858 Pfam JmjC domain, hydroxylase 265 388 IPR003347 -
Gso9g1715 858 PANTHER LYSINE-SPECIFIC DEMETHYLASE 53 854 - -
Gso9g1715 858 PANTHER TRANSCRIPTION FACTOR JUMONJI (JMJ) FAMILY PROTEIN / ZINC FINGER (C5HC2 TYPE) FAMILY PROTEIN 53 854 - -
Gso9g1715 858 MobiDBLite consensus disorder prediction 724 776 - -
Gso9g1715 858 MobiDBLite consensus disorder prediction 812 844 - -
Gso9g1715 858 SMART JmjN_1 87 128 IPR003349 -
Gso9g1715 858 SUPERFAMILY Clavaminate synthase-like 166 421 - -
Gso9g1715 858 Gene3D Cupin 81 410 - -
Gso9g1715 858 MobiDBLite consensus disorder prediction 811 858 - -
Gso9g1715 858 MobiDBLite consensus disorder prediction 724 756 - -
Gso9g1715 858 MobiDBLite consensus disorder prediction 762 776 - -
Gso9g1715 858 ProSiteProfiles JmjN domain profile. 88 129 IPR003349 -
Gso9g1715 858 Pfam jmjN domain 89 121 IPR003349 -
Gso9g1715 858 ProSiteProfiles JmjC domain profile. 235 405 IPR003347 -
Gso9g1715 858 SMART cupin_9 232 405 IPR003347 -
Gso9g1715 858 Pfam C5HC2 zinc finger 485 536 IPR004198 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Gso9g1715 Gso-Chr9 41575463 41581878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Gso9g1715 85 544 JUMONJI Transcription Factor Family AT2G34880 32.833 2.12e-63 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Gso9g1715 JmjC 1.3e-39 CL0029
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Gso9g1715 - - gmx:100798611 1711.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Gso1g0130 1 1466979 1473486 Gso9g1715 9 41575463 41581878 GST